Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.22□□□□□ -0.29
Smad1P70340 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smad1P70340 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smad1P70340 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Smad1P70340 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.22□□□□□ -0.29
Smad1P70340 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Smad1P70340 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smad1P70340 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.22□□□□□ -0.29
Smad1P70340 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smad1P70340 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smad1P70340 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
Smad1P70340 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Smad1P70340 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smad1P70340 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smad1P70340 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.22□□□□□ -0.29
Smad1P70340 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Smad1P70340 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Smad1P70340 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Smad1P70340 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smad1P70340 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smad1P70340 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smad1P70340 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smad1P70340 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smad1P70340 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smad1P70340 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.21□□□□□ -0.29
Smad1P70340 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Smad1P70340 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.21□□□□□ -0.29
Smad1P70340 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smad1P70340 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
Smad1P70340 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smad1P70340 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smad1P70340 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smad1P70340 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smad1P70340 Gm13612-201ENSMUST00000119276 390 ntBASIC13.21□□□□□ -0.29
Smad1P70340 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.21□□□□□ -0.29
Smad1P70340 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.21□□□□□ -0.29
Smad1P70340 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Smad1P70340 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smad1P70340 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.21□□□□□ -0.29
Smad1P70340 Gm38671-201ENSMUST00000200573 130 ntBASIC13.21□□□□□ -0.29
Smad1P70340 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.21□□□□□ -0.29
Smad1P70340 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.21□□□□□ -0.29
Smad1P70340 Gm6983-201ENSMUST00000214912 628 ntBASIC13.21□□□□□ -0.29
Smad1P70340 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.21□□□□□ -0.29
Smad1P70340 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smad1P70340 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smad1P70340 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Smad1P70340 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smad1P70340 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smad1P70340 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smad1P70340 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Smad1P70340 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smad1P70340 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smad1P70340 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smad1P70340 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smad1P70340 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smad1P70340 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smad1P70340 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smad1P70340 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smad1P70340 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smad1P70340 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smad1P70340 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smad1P70340 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Smad1P70340 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Smad1P70340 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.3
Smad1P70340 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Smad1P70340 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smad1P70340 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smad1P70340 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Smad1P70340 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smad1P70340 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smad1P70340 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smad1P70340 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Smad1P70340 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smad1P70340 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smad1P70340 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smad1P70340 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Smad1P70340 Gm15371-201ENSMUST00000117057 784 ntBASIC13.2□□□□□ -0.3
Smad1P70340 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.2□□□□□ -0.3
Smad1P70340 Gm24644-201ENSMUST00000157114 139 ntBASIC13.2□□□□□ -0.3
Smad1P70340 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smad1P70340 Mir3102-201ENSMUST00000175555 104 ntBASIC13.2□□□□□ -0.3
Smad1P70340 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.2□□□□□ -0.3
Smad1P70340 Gm43818-201ENSMUST00000200605 466 ntBASIC13.2□□□□□ -0.3
Smad1P70340 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.2□□□□□ -0.3
Smad1P70340 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smad1P70340 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.2□□□□□ -0.3
Smad1P70340 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smad1P70340 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Smad1P70340 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smad1P70340 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smad1P70340 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Smad1P70340 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smad1P70340 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smad1P70340 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Smad1P70340 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smad1P70340 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.2□□□□□ -0.3
Smad1P70340 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smad1P70340 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Smad1P70340 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms