Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lhx1P63006 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lhx1P63006 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lhx1P63006 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Lhx1P63006 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lhx1P63006 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.58□□□□□ -0.4
Lhx1P63006 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.58□□□□□ -0.4
Lhx1P63006 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lhx1P63006 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.58□□□□□ -0.4
Lhx1P63006 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.57□□□□□ -0.4
Lhx1P63006 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
Lhx1P63006 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.57□□□□□ -0.4
Lhx1P63006 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Lhx1P63006 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Lhx1P63006 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.57□□□□□ -0.4
Lhx1P63006 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Lhx1P63006 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Mir6420-201ENSMUST00000185032 102 ntBASIC12.57□□□□□ -0.4
Lhx1P63006 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.57□□□□□ -0.4
Lhx1P63006 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.57□□□□□ -0.4
Lhx1P63006 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.57□□□□□ -0.4
Lhx1P63006 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Lhx1P63006 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Lhx1P63006 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Lhx1P63006 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.57□□□□□ -0.4
Lhx1P63006 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.57□□□□□ -0.4
Lhx1P63006 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.57□□□□□ -0.4
Lhx1P63006 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lhx1P63006 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Lhx1P63006 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lhx1P63006 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lhx1P63006 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lhx1P63006 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.56□□□□□ -0.4
Lhx1P63006 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lhx1P63006 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lhx1P63006 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lhx1P63006 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lhx1P63006 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lhx1P63006 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.56□□□□□ -0.4
Lhx1P63006 Gm11964-201ENSMUST00000120982 444 ntBASIC12.56□□□□□ -0.4
Lhx1P63006 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.56□□□□□ -0.4
Lhx1P63006 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.56□□□□□ -0.4
Lhx1P63006 Gm2991-201ENSMUST00000173338 480 ntBASIC12.56□□□□□ -0.4
Lhx1P63006 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.56□□□□□ -0.4
Lhx1P63006 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.56□□□□□ -0.4
Lhx1P63006 Gm44405-201ENSMUST00000198952 126 ntBASIC12.56□□□□□ -0.4
Lhx1P63006 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.56□□□□□ -0.4
Lhx1P63006 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lhx1P63006 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Lhx1P63006 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.56□□□□□ -0.4
Lhx1P63006 Cts7-204ENSMUST00000225321 1257 ntBASIC12.56□□□□□ -0.4
Lhx1P63006 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lhx1P63006 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lhx1P63006 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lhx1P63006 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lhx1P63006 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Lhx1P63006 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lhx1P63006 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lhx1P63006 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lhx1P63006 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lhx1P63006 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lhx1P63006 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lhx1P63006 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lhx1P63006 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.56□□□□□ -0.4
Lhx1P63006 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lhx1P63006 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lhx1P63006 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms