Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ybx1P62960 Gm7857-201ENSMUST00000117957 358 ntBASIC13.11□□□□□ -0.31
Ybx1P62960 Gm12058-201ENSMUST00000118614 437 ntBASIC13.11□□□□□ -0.31
Ybx1P62960 Gm13665-201ENSMUST00000120830 528 ntBASIC13.11□□□□□ -0.31
Ybx1P62960 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ybx1P62960 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ybx1P62960 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.11□□□□□ -0.31
Ybx1P62960 Mir6927-201ENSMUST00000184494 71 ntBASIC13.11□□□□□ -0.31
Ybx1P62960 Gm3096-201ENSMUST00000185770 364 ntBASIC13.11□□□□□ -0.31
Ybx1P62960 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.11□□□□□ -0.31
Ybx1P62960 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
Ybx1P62960 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.11□□□□□ -0.31
Ybx1P62960 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.11□□□□□ -0.31
Ybx1P62960 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.11□□□□□ -0.31
Ybx1P62960 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.11□□□□□ -0.31
Ybx1P62960 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ybx1P62960 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ybx1P62960 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.11□□□□□ -0.31
Ybx1P62960 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ybx1P62960 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Ybx1P62960 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ybx1P62960 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ybx1P62960 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.11□□□□□ -0.31
Ybx1P62960 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ybx1P62960 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ybx1P62960 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.11□□□□□ -0.31
Ybx1P62960 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ybx1P62960 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.11□□□□□ -0.31
Ybx1P62960 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.1□□□□□ -0.31
Ybx1P62960 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ybx1P62960 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ybx1P62960 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ybx1P62960 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Ybx1P62960 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.1□□□□□ -0.31
Ybx1P62960 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ybx1P62960 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ybx1P62960 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ybx1P62960 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ybx1P62960 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.1□□□□□ -0.31
Ybx1P62960 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ybx1P62960 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ybx1P62960 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ybx1P62960 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ybx1P62960 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ybx1P62960 Gm13736-201ENSMUST00000119272 253 ntBASIC13.1□□□□□ -0.31
Ybx1P62960 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Ybx1P62960 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.1□□□□□ -0.31
Ybx1P62960 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ybx1P62960 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.1□□□□□ -0.31
Ybx1P62960 Gm44405-201ENSMUST00000198952 126 ntBASIC13.1□□□□□ -0.31
Ybx1P62960 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ybx1P62960 Gm45224-201ENSMUST00000208203 414 ntBASIC13.1□□□□□ -0.31
Ybx1P62960 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.1□□□□□ -0.31
Ybx1P62960 AC153937.1-201ENSMUST00000218734 412 ntBASIC13.1□□□□□ -0.31
Ybx1P62960 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ybx1P62960 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.1□□□□□ -0.31
Ybx1P62960 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ybx1P62960 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ybx1P62960 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ybx1P62960 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ybx1P62960 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ybx1P62960 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ybx1P62960 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ybx1P62960 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ybx1P62960 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ybx1P62960 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Ybx1P62960 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.1□□□□□ -0.31
Ybx1P62960 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ybx1P62960 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ybx1P62960 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.09□□□□□ -0.31
Ybx1P62960 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ybx1P62960 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ybx1P62960 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ybx1P62960 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ybx1P62960 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ybx1P62960 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ybx1P62960 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ybx1P62960 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.09□□□□□ -0.31
Ybx1P62960 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ybx1P62960 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Ybx1P62960 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ybx1P62960 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ybx1P62960 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.09□□□□□ -0.31
Ybx1P62960 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.09□□□□□ -0.31
Ybx1P62960 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ybx1P62960 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.09□□□□□ -0.31
Ybx1P62960 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ybx1P62960 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ybx1P62960 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ybx1P62960 Gm22902-201ENSMUST00000158488 302 ntBASIC13.09□□□□□ -0.31
Ybx1P62960 Gm26361-201ENSMUST00000158868 186 ntBASIC13.09□□□□□ -0.31
Ybx1P62960 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ybx1P62960 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ybx1P62960 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ybx1P62960 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ybx1P62960 Gm25732-201ENSMUST00000175168 60 ntBASIC13.09□□□□□ -0.31
Ybx1P62960 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ybx1P62960 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.09□□□□□ -0.31
Ybx1P62960 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.09□□□□□ -0.31
Ybx1P62960 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms