Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1bP61025 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1bP61025 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
Cks1bP61025 Bloc1s5-203ENSMUST00000224902 612 ntBASIC9.16□□□□□ -0.94
Cks1bP61025 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1bP61025 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1bP61025 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1bP61025 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Cks1bP61025 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1bP61025 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1bP61025 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1bP61025 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Cks1bP61025 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1bP61025 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1bP61025 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1bP61025 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1bP61025 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Cks1bP61025 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Cks1bP61025 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1bP61025 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1bP61025 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Cks1bP61025 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1bP61025 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1bP61025 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1bP61025 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1bP61025 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1bP61025 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
Cks1bP61025 Gm10829-201ENSMUST00000202084 2988 ntBASIC9.15□□□□□ -0.94
Cks1bP61025 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Cks1bP61025 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Gm1401-201ENSMUST00000122048 772 ntBASIC9.15□□□□□ -0.94
Cks1bP61025 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC9.15□□□□□ -0.94
Cks1bP61025 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Cks1bP61025 Gm9824-201ENSMUST00000178707 561 ntBASIC9.15□□□□□ -0.94
Cks1bP61025 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.94
Cks1bP61025 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC9.15□□□□□ -0.94
Cks1bP61025 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC9.15□□□□□ -0.94
Cks1bP61025 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cks1bP61025 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Cks1bP61025 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Cks1bP61025 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC9.15□□□□□ -0.95
Cks1bP61025 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Cks1bP61025 Gm37333-201ENSMUST00000192904 2251 ntBASIC9.15□□□□□ -0.95
Cks1bP61025 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Cks1bP61025 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC9.15□□□□□ -0.95
Cks1bP61025 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Cks1bP61025 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Cks1bP61025 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Cks1bP61025 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC9.15□□□□□ -0.95
Cks1bP61025 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Cks1bP61025 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cks1bP61025 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cks1bP61025 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Cks1bP61025 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cks1bP61025 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Cks1bP61025 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cks1bP61025 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC9.14□□□□□ -0.95
Cks1bP61025 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cks1bP61025 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cks1bP61025 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cks1bP61025 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC9.14□□□□□ -0.95
Cks1bP61025 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Cks1bP61025 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Cks1bP61025 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Cks1bP61025 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cks1bP61025 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cks1bP61025 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Cks1bP61025 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.14□□□□□ -0.95
Cks1bP61025 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cks1bP61025 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms