Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LmnaP48678 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
LmnaP48678 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LmnaP48678 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
LmnaP48678 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LmnaP48678 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LmnaP48678 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LmnaP48678 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LmnaP48678 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LmnaP48678 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LmnaP48678 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LmnaP48678 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
LmnaP48678 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LmnaP48678 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LmnaP48678 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LmnaP48678 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LmnaP48678 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LmnaP48678 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LmnaP48678 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LmnaP48678 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LmnaP48678 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.37□□□□□ -0.27
LmnaP48678 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LmnaP48678 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LmnaP48678 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.37□□□□□ -0.27
LmnaP48678 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
LmnaP48678 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LmnaP48678 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.37□□□□□ -0.27
LmnaP48678 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LmnaP48678 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.37□□□□□ -0.27
LmnaP48678 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LmnaP48678 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LmnaP48678 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC13.37□□□□□ -0.27
LmnaP48678 Gm38158-201ENSMUST00000194617 339 ntBASIC13.37□□□□□ -0.27
LmnaP48678 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.37□□□□□ -0.27
LmnaP48678 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.37□□□□□ -0.27
LmnaP48678 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.37□□□□□ -0.27
LmnaP48678 AC155266.1-201ENSMUST00000220762 904 ntBASIC13.37□□□□□ -0.27
LmnaP48678 Itm2b-204ENSMUST00000228637 783 ntBASIC13.37□□□□□ -0.27
LmnaP48678 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LmnaP48678 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LmnaP48678 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
LmnaP48678 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LmnaP48678 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LmnaP48678 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LmnaP48678 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LmnaP48678 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LmnaP48678 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LmnaP48678 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LmnaP48678 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
LmnaP48678 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
LmnaP48678 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
LmnaP48678 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LmnaP48678 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.36□□□□□ -0.27
LmnaP48678 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.36□□□□□ -0.27
LmnaP48678 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LmnaP48678 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.36□□□□□ -0.27
LmnaP48678 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
LmnaP48678 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LmnaP48678 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LmnaP48678 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LmnaP48678 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC13.36□□□□□ -0.27
LmnaP48678 Gm13297-201ENSMUST00000120205 934 ntBASIC13.36□□□□□ -0.27
LmnaP48678 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.36□□□□□ -0.27
LmnaP48678 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LmnaP48678 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.36□□□□□ -0.27
LmnaP48678 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.36□□□□□ -0.27
LmnaP48678 Gm22334-201ENSMUST00000158070 133 ntBASIC13.36□□□□□ -0.27
LmnaP48678 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.36□□□□□ -0.27
LmnaP48678 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC13.36□□□□□ -0.27
LmnaP48678 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LmnaP48678 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.36□□□□□ -0.27
LmnaP48678 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LmnaP48678 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LmnaP48678 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LmnaP48678 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LmnaP48678 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LmnaP48678 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LmnaP48678 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LmnaP48678 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LmnaP48678 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.36□□□□□ -0.27
LmnaP48678 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LmnaP48678 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LmnaP48678 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.36□□□□□ -0.27
LmnaP48678 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LmnaP48678 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LmnaP48678 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LmnaP48678 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LmnaP48678 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LmnaP48678 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.36□□□□□ -0.27
LmnaP48678 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LmnaP48678 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LmnaP48678 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LmnaP48678 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LmnaP48678 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LmnaP48678 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
LmnaP48678 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LmnaP48678 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LmnaP48678 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.35□□□□□ -0.27
LmnaP48678 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LmnaP48678 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms