Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox6P40645 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Sox6P40645 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox6P40645 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.04□□□□□ -0.48
Sox6P40645 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sox6P40645 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox6P40645 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox6P40645 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox6P40645 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox6P40645 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox6P40645 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox6P40645 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox6P40645 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox6P40645 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox6P40645 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.04□□□□□ -0.48
Sox6P40645 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sox6P40645 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.04□□□□□ -0.48
Sox6P40645 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox6P40645 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.04□□□□□ -0.48
Sox6P40645 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox6P40645 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Sox6P40645 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Sox6P40645 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Sox6P40645 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox6P40645 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox6P40645 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox6P40645 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox6P40645 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sox6P40645 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox6P40645 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox6P40645 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox6P40645 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox6P40645 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox6P40645 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox6P40645 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox6P40645 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Sox6P40645 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.03□□□□□ -0.48
Sox6P40645 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.03□□□□□ -0.48
Sox6P40645 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.03□□□□□ -0.48
Sox6P40645 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Sox6P40645 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.03□□□□□ -0.48
Sox6P40645 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.03□□□□□ -0.48
Sox6P40645 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.03□□□□□ -0.48
Sox6P40645 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.03□□□□□ -0.48
Sox6P40645 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.03□□□□□ -0.48
Sox6P40645 Gm12403-201ENSMUST00000121384 959 ntBASIC12.03□□□□□ -0.48
Sox6P40645 Gm11918-201ENSMUST00000121660 179 ntBASIC12.03□□□□□ -0.48
Sox6P40645 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.03□□□□□ -0.48
Sox6P40645 Gm15429-201ENSMUST00000151268 798 ntBASIC12.03□□□□□ -0.48
Sox6P40645 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.03□□□□□ -0.48
Sox6P40645 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.03□□□□□ -0.48
Sox6P40645 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.03□□□□□ -0.48
Sox6P40645 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.03□□□□□ -0.48
Sox6P40645 Gm27701-201ENSMUST00000184498 110 ntBASIC12.03□□□□□ -0.48
Sox6P40645 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.03□□□□□ -0.48
Sox6P40645 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.03□□□□□ -0.48
Sox6P40645 Gm6983-201ENSMUST00000214912 628 ntBASIC12.03□□□□□ -0.48
Sox6P40645 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.03□□□□□ -0.48
Sox6P40645 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.03□□□□□ -0.48
Sox6P40645 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sox6P40645 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Sox6P40645 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.03□□□□□ -0.48
Sox6P40645 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox6P40645 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Sox6P40645 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sox6P40645 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox6P40645 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sox6P40645 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms