Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.23□□□□□ -0.61
Upk2P38575 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.23□□□□□ -0.61
Upk2P38575 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Upk2P38575 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk2P38575 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Upk2P38575 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Upk2P38575 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.23□□□□□ -0.61
Upk2P38575 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Upk2P38575 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Upk2P38575 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.23□□□□□ -0.61
Upk2P38575 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.23□□□□□ -0.61
Upk2P38575 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk2P38575 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk2P38575 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk2P38575 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Upk2P38575 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk2P38575 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk2P38575 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk2P38575 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk2P38575 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Upk2P38575 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Upk2P38575 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk2P38575 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Upk2P38575 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk2P38575 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Upk2P38575 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.22□□□□□ -0.61
Upk2P38575 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.22□□□□□ -0.61
Upk2P38575 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.22□□□□□ -0.61
Upk2P38575 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk2P38575 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Upk2P38575 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Upk2P38575 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.22□□□□□ -0.61
Upk2P38575 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.22□□□□□ -0.61
Upk2P38575 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk2P38575 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.22□□□□□ -0.61
Upk2P38575 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Upk2P38575 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Upk2P38575 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Upk2P38575 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.22□□□□□ -0.61
Upk2P38575 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Upk2P38575 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.22□□□□□ -0.61
Upk2P38575 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.22□□□□□ -0.61
Upk2P38575 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.22□□□□□ -0.61
Upk2P38575 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.22□□□□□ -0.61
Upk2P38575 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.22□□□□□ -0.61
Upk2P38575 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk2P38575 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk2P38575 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk2P38575 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk2P38575 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Upk2P38575 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk2P38575 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Upk2P38575 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk2P38575 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Upk2P38575 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk2P38575 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk2P38575 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Upk2P38575 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk2P38575 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk2P38575 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Upk2P38575 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk2P38575 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk2P38575 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk2P38575 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk2P38575 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk2P38575 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk2P38575 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk2P38575 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk2P38575 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk2P38575 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk2P38575 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Upk2P38575 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.21□□□□□ -0.61
Upk2P38575 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Upk2P38575 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Upk2P38575 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk2P38575 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk2P38575 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Upk2P38575 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.21□□□□□ -0.61
Upk2P38575 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.21□□□□□ -0.61
Upk2P38575 Gm12363-201ENSMUST00000122250 668 ntBASIC11.21□□□□□ -0.61
Upk2P38575 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Upk2P38575 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Upk2P38575 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Upk2P38575 Gm7029-201ENSMUST00000173226 450 ntBASIC11.21□□□□□ -0.61
Upk2P38575 Gm26927-201ENSMUST00000182385 965 ntBASIC11.21□□□□□ -0.61
Upk2P38575 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Upk2P38575 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk2P38575 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Upk2P38575 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk2P38575 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk2P38575 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Upk2P38575 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Upk2P38575 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.62
Upk2P38575 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Upk2P38575 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.62
Upk2P38575 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Upk2P38575 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Upk2P38575 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Upk2P38575 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
Upk2P38575 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms