Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.96□□□□□ -0.17
Sox5P35710 Gm18624-201ENSMUST00000220966 658 ntBASIC13.96□□□□□ -0.17
Sox5P35710 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.96□□□□□ -0.17
Sox5P35710 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Sox5P35710 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sox5P35710 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox5P35710 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Sox5P35710 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.96□□□□□ -0.17
Sox5P35710 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox5P35710 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.96□□□□□ -0.17
Sox5P35710 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox5P35710 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox5P35710 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox5P35710 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox5P35710 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox5P35710 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox5P35710 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Sox5P35710 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox5P35710 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox5P35710 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Sox5P35710 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
Sox5P35710 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox5P35710 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox5P35710 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Sox5P35710 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox5P35710 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sox5P35710 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox5P35710 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sox5P35710 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.95□□□□□ -0.18
Sox5P35710 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.95□□□□□ -0.18
Sox5P35710 Gm9630-201ENSMUST00000178304 885 ntBASIC13.95□□□□□ -0.18
Sox5P35710 Gm2495-201ENSMUST00000191160 466 ntBASIC13.95□□□□□ -0.18
Sox5P35710 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.95□□□□□ -0.18
Sox5P35710 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.95□□□□□ -0.18
Sox5P35710 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.95□□□□□ -0.18
Sox5P35710 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.95□□□□□ -0.18
Sox5P35710 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox5P35710 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sox5P35710 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox5P35710 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox5P35710 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox5P35710 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox5P35710 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox5P35710 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Sox5P35710 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox5P35710 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.95□□□□□ -0.18
Sox5P35710 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sox5P35710 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox5P35710 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox5P35710 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox5P35710 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox5P35710 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox5P35710 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.94□□□□□ -0.18
Sox5P35710 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sox5P35710 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox5P35710 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.94□□□□□ -0.18
Sox5P35710 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.94□□□□□ -0.18
Sox5P35710 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox5P35710 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.94□□□□□ -0.18
Sox5P35710 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.94□□□□□ -0.18
Sox5P35710 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox5P35710 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox5P35710 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox5P35710 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox5P35710 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox5P35710 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox5P35710 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox5P35710 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox5P35710 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox5P35710 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox5P35710 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox5P35710 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sox5P35710 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox5P35710 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox5P35710 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox5P35710 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sox5P35710 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sox5P35710 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sox5P35710 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox5P35710 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox5P35710 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sox5P35710 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox5P35710 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox5P35710 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox5P35710 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox5P35710 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox5P35710 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.93□□□□□ -0.18
Sox5P35710 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox5P35710 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox5P35710 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Sox5P35710 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox5P35710 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox5P35710 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Sox5P35710 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox5P35710 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.93□□□□□ -0.18
Sox5P35710 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox5P35710 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sox5P35710 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sox5P35710 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Sox5P35710 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms