Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Slc6a1P31648 Gm12151-201ENSMUST00000121374 290 ntBASIC11.03□□□□□ -0.64
Slc6a1P31648 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.03□□□□□ -0.64
Slc6a1P31648 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.03□□□□□ -0.64
Slc6a1P31648 Shd-206ENSMUST00000225145 998 ntBASIC11.03□□□□□ -0.64
Slc6a1P31648 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Slc6a1P31648 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.03□□□□□ -0.64
Slc6a1P31648 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.03□□□□□ -0.64
Slc6a1P31648 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Slc6a1P31648 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Slc6a1P31648 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Slc6a1P31648 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Slc6a1P31648 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Slc6a1P31648 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Slc6a1P31648 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Slc6a1P31648 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.02□□□□□ -0.65
Slc6a1P31648 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc6a1P31648 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.02□□□□□ -0.65
Slc6a1P31648 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc6a1P31648 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc6a1P31648 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Slc6a1P31648 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc6a1P31648 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.02□□□□□ -0.65
Slc6a1P31648 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Slc6a1P31648 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc6a1P31648 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.02□□□□□ -0.65
Slc6a1P31648 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.02□□□□□ -0.65
Slc6a1P31648 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.02□□□□□ -0.65
Slc6a1P31648 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.02□□□□□ -0.65
Slc6a1P31648 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.02□□□□□ -0.65
Slc6a1P31648 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Slc6a1P31648 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Slc6a1P31648 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc6a1P31648 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc6a1P31648 Gm24694-201ENSMUST00000180054 110 ntBASIC11.02□□□□□ -0.65
Slc6a1P31648 Gm27663-201ENSMUST00000184839 110 ntBASIC11.02□□□□□ -0.65
Slc6a1P31648 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Slc6a1P31648 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Slc6a1P31648 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Slc6a1P31648 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.02□□□□□ -0.65
Slc6a1P31648 Gm7730-201ENSMUST00000212486 454 ntBASIC11.02□□□□□ -0.65
Slc6a1P31648 Gm46209-201ENSMUST00000217912 553 ntBASIC11.02□□□□□ -0.65
Slc6a1P31648 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc6a1P31648 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Slc6a1P31648 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.02□□□□□ -0.65
Slc6a1P31648 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc6a1P31648 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc6a1P31648 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Slc6a1P31648 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc6a1P31648 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Slc6a1P31648 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc6a1P31648 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc6a1P31648 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc6a1P31648 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc6a1P31648 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc6a1P31648 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc6a1P31648 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Slc6a1P31648 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc6a1P31648 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc6a1P31648 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc6a1P31648 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Slc6a1P31648 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.01□□□□□ -0.65
Slc6a1P31648 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.01□□□□□ -0.65
Slc6a1P31648 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc6a1P31648 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.01□□□□□ -0.65
Slc6a1P31648 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc6a1P31648 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.01□□□□□ -0.65
Slc6a1P31648 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc6a1P31648 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Slc6a1P31648 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Slc6a1P31648 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc6a1P31648 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms