Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.68□□□□□ -0.22
Mmp3P28862 Gm39404-201ENSMUST00000216350 313 ntBASIC13.68□□□□□ -0.22
Mmp3P28862 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.68□□□□□ -0.22
Mmp3P28862 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp3P28862 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.68□□□□□ -0.22
Mmp3P28862 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp3P28862 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp3P28862 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp3P28862 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp3P28862 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp3P28862 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Mmp3P28862 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Mmp3P28862 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp3P28862 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp3P28862 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.68□□□□□ -0.22
Mmp3P28862 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp3P28862 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Mmp3P28862 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.68□□□□□ -0.22
Mmp3P28862 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp3P28862 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp3P28862 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Mmp3P28862 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp3P28862 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Mmp3P28862 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Mmp3P28862 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp3P28862 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp3P28862 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp3P28862 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.67□□□□□ -0.22
Mmp3P28862 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Mmp3P28862 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp3P28862 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Mmp3P28862 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Mmp3P28862 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp3P28862 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Mmp3P28862 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp3P28862 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp3P28862 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp3P28862 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.67□□□□□ -0.22
Mmp3P28862 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp3P28862 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Mmp3P28862 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp3P28862 Gm13315-201ENSMUST00000120376 991 ntBASIC13.67□□□□□ -0.22
Mmp3P28862 Gm13665-201ENSMUST00000120830 528 ntBASIC13.67□□□□□ -0.22
Mmp3P28862 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.67□□□□□ -0.22
Mmp3P28862 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp3P28862 Gm13570-201ENSMUST00000140763 309 ntBASIC13.67□□□□□ -0.22
Mmp3P28862 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp3P28862 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Mmp3P28862 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.67□□□□□ -0.22
Mmp3P28862 Gm5363-201ENSMUST00000211927 938 ntBASIC13.67□□□□□ -0.22
Mmp3P28862 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.67□□□□□ -0.22
Mmp3P28862 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp3P28862 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp3P28862 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp3P28862 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp3P28862 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp3P28862 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp3P28862 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp3P28862 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp3P28862 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Mmp3P28862 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp3P28862 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp3P28862 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.67□□□□□ -0.22
Mmp3P28862 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp3P28862 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp3P28862 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp3P28862 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp3P28862 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp3P28862 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp3P28862 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp3P28862 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp3P28862 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp3P28862 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp3P28862 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp3P28862 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Mmp3P28862 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp3P28862 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.66□□□□□ -0.22
Mmp3P28862 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Mmp3P28862 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
Mmp3P28862 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp3P28862 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp3P28862 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp3P28862 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
Mmp3P28862 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp3P28862 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.66□□□□□ -0.22
Mmp3P28862 Gm14017-201ENSMUST00000121934 386 ntBASIC13.66□□□□□ -0.22
Mmp3P28862 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp3P28862 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.66□□□□□ -0.22
Mmp3P28862 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp3P28862 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.66□□□□□ -0.22
Mmp3P28862 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.66□□□□□ -0.22
Mmp3P28862 Gm26461-201ENSMUST00000175064 290 ntBASIC13.66□□□□□ -0.22
Mmp3P28862 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.66□□□□□ -0.22
Mmp3P28862 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp3P28862 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.66□□□□□ -0.22
Mmp3P28862 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp3P28862 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp3P28862 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp3P28862 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.66□□□□□ -0.22
Mmp3P28862 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms