Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Col2a1P28481 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col2a1P28481 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col2a1P28481 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col2a1P28481 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.33□□□□□ -0.11
Col2a1P28481 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Col2a1P28481 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col2a1P28481 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Col2a1P28481 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.33□□□□□ -0.12
Col2a1P28481 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col2a1P28481 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.33□□□□□ -0.12
Col2a1P28481 Gm7848-201ENSMUST00000210739 718 ntBASIC14.33□□□□□ -0.12
Col2a1P28481 Gm5455-201ENSMUST00000058710 715 ntBASIC14.33□□□□□ -0.12
Col2a1P28481 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Col2a1P28481 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col2a1P28481 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.33□□□□□ -0.12
Col2a1P28481 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col2a1P28481 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col2a1P28481 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col2a1P28481 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Col2a1P28481 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col2a1P28481 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col2a1P28481 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col2a1P28481 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col2a1P28481 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Col2a1P28481 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col2a1P28481 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col2a1P28481 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col2a1P28481 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col2a1P28481 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col2a1P28481 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col2a1P28481 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col2a1P28481 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col2a1P28481 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col2a1P28481 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col2a1P28481 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col2a1P28481 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col2a1P28481 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col2a1P28481 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Col2a1P28481 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col2a1P28481 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col2a1P28481 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col2a1P28481 Gm22133-201ENSMUST00000102082 109 ntBASIC14.32□□□□□ -0.12
Col2a1P28481 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col2a1P28481 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.32□□□□□ -0.12
Col2a1P28481 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col2a1P28481 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col2a1P28481 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.32□□□□□ -0.12
Col2a1P28481 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC14.32□□□□□ -0.12
Col2a1P28481 Gm37986-201ENSMUST00000193285 383 ntBASIC14.32□□□□□ -0.12
Col2a1P28481 Gm18711-201ENSMUST00000199341 750 ntBASIC14.32□□□□□ -0.12
Col2a1P28481 Gm3786-201ENSMUST00000202659 378 ntBASIC14.32□□□□□ -0.12
Col2a1P28481 Gm17827-201ENSMUST00000211825 742 ntBASIC14.32□□□□□ -0.12
Col2a1P28481 Gm270-201ENSMUST00000223010 976 ntBASIC14.32□□□□□ -0.12
Col2a1P28481 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col2a1P28481 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col2a1P28481 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col2a1P28481 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col2a1P28481 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col2a1P28481 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col2a1P28481 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col2a1P28481 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col2a1P28481 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col2a1P28481 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col2a1P28481 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Col2a1P28481 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Col2a1P28481 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col2a1P28481 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col2a1P28481 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Col2a1P28481 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col2a1P28481 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col2a1P28481 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col2a1P28481 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col2a1P28481 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col2a1P28481 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col2a1P28481 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.32□□□□□ -0.12
Col2a1P28481 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col2a1P28481 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.32□□□□□ -0.12
Col2a1P28481 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.32□□□□□ -0.12
Col2a1P28481 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.31□□□□□ -0.12
Col2a1P28481 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Col2a1P28481 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.31□□□□□ -0.12
Col2a1P28481 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.31□□□□□ -0.12
Col2a1P28481 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Col2a1P28481 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col2a1P28481 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Col2a1P28481 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Col2a1P28481 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.31□□□□□ -0.12
Col2a1P28481 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.31□□□□□ -0.12
Col2a1P28481 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col2a1P28481 Gm18038-201ENSMUST00000197900 485 ntBASIC14.31□□□□□ -0.12
Col2a1P28481 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.31□□□□□ -0.12
Col2a1P28481 Gm5369-201ENSMUST00000217499 588 ntBASIC14.31□□□□□ -0.12
Col2a1P28481 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col2a1P28481 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.31□□□□□ -0.12
Col2a1P28481 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col2a1P28481 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col2a1P28481 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col2a1P28481 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col2a1P28481 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms