Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.24□□□□□ -0.13
Gjb1P28230 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Gjb1P28230 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gjb1P28230 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gjb1P28230 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gjb1P28230 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gjb1P28230 Gm13035-201ENSMUST00000117496 342 ntBASIC14.24□□□□□ -0.13
Gjb1P28230 Gm6506-201ENSMUST00000119775 1136 ntBASIC14.24□□□□□ -0.13
Gjb1P28230 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC14.24□□□□□ -0.13
Gjb1P28230 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gjb1P28230 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gjb1P28230 Gm28324-201ENSMUST00000187913 264 ntBASIC14.24□□□□□ -0.13
Gjb1P28230 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gjb1P28230 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gjb1P28230 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gjb1P28230 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.24□□□□□ -0.13
Gjb1P28230 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.24□□□□□ -0.13
Gjb1P28230 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.24□□□□□ -0.13
Gjb1P28230 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.24□□□□□ -0.13
Gjb1P28230 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gjb1P28230 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gjb1P28230 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Gjb1P28230 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gjb1P28230 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gjb1P28230 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gjb1P28230 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.24□□□□□ -0.13
Gjb1P28230 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gjb1P28230 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gjb1P28230 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gjb1P28230 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gjb1P28230 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gjb1P28230 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gjb1P28230 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Gjb1P28230 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gjb1P28230 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gjb1P28230 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gjb1P28230 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.23□□□□□ -0.13
Gjb1P28230 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Gjb1P28230 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
Gjb1P28230 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Gjb1P28230 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gjb1P28230 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gjb1P28230 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gjb1P28230 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gjb1P28230 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gjb1P28230 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Gjb1P28230 Gm25880-201ENSMUST00000104331 132 ntBASIC14.23□□□□□ -0.13
Gjb1P28230 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Gjb1P28230 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gjb1P28230 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gjb1P28230 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
Gjb1P28230 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gjb1P28230 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gjb1P28230 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC14.23□□□□□ -0.13
Gjb1P28230 CT009713.8-202ENSMUST00000224732 385 ntBASIC14.23□□□□□ -0.13
Gjb1P28230 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Gjb1P28230 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.23□□□□□ -0.13
Gjb1P28230 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gjb1P28230 Matn2-206ENSMUST00000228570 2798 ntBASIC14.23□□□□□ -0.13
Gjb1P28230 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gjb1P28230 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.23□□□□□ -0.13
Gjb1P28230 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gjb1P28230 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gjb1P28230 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gjb1P28230 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gjb1P28230 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gjb1P28230 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gjb1P28230 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gjb1P28230 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.22□□□□□ -0.13
Gjb1P28230 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.22□□□□□ -0.13
Gjb1P28230 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gjb1P28230 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Gjb1P28230 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gjb1P28230 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gjb1P28230 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gjb1P28230 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gjb1P28230 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Gjb1P28230 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gjb1P28230 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gjb1P28230 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Gjb1P28230 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.22□□□□□ -0.13
Gjb1P28230 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Gjb1P28230 Gm23251-201ENSMUST00000103773 110 ntBASIC14.22□□□□□ -0.13
Gjb1P28230 Gm11941-201ENSMUST00000119904 610 ntBASIC14.22□□□□□ -0.13
Gjb1P28230 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC14.22□□□□□ -0.13
Gjb1P28230 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gjb1P28230 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.22□□□□□ -0.13
Gjb1P28230 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Gjb1P28230 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Gjb1P28230 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
Gjb1P28230 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gjb1P28230 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gjb1P28230 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gjb1P28230 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gjb1P28230 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gjb1P28230 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gjb1P28230 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gjb1P28230 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gjb1P28230 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gjb1P28230 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms