Protein–RNA interactions for Protein: P20181

Ntf3, Neurotrophin-3, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ntf3P20181 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ntf3P20181 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ntf3P20181 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ntf3P20181 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ntf3P20181 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ntf3P20181 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ntf3P20181 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ntf3P20181 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ntf3P20181 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ntf3P20181 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ntf3P20181 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ntf3P20181 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.2□□□□□ -0.62
Ntf3P20181 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
Ntf3P20181 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ntf3P20181 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ntf3P20181 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.2□□□□□ -0.62
Ntf3P20181 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ntf3P20181 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.2□□□□□ -0.62
Ntf3P20181 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ntf3P20181 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ntf3P20181 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ntf3P20181 Gm38225-201ENSMUST00000194001 393 ntBASIC11.2□□□□□ -0.62
Ntf3P20181 Gm35960-201ENSMUST00000202712 767 ntBASIC11.2□□□□□ -0.62
Ntf3P20181 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.2□□□□□ -0.62
Ntf3P20181 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ntf3P20181 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ntf3P20181 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.2□□□□□ -0.62
Ntf3P20181 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ntf3P20181 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ntf3P20181 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ntf3P20181 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Ntf3P20181 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ntf3P20181 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ntf3P20181 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ntf3P20181 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ntf3P20181 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.2□□□□□ -0.62
Ntf3P20181 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.2□□□□□ -0.62
Ntf3P20181 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.2□□□□□ -0.62
Ntf3P20181 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.2□□□□□ -0.62
Ntf3P20181 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Ntf3P20181 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ntf3P20181 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.2□□□□□ -0.62
Ntf3P20181 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.2□□□□□ -0.62
Ntf3P20181 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ntf3P20181 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ntf3P20181 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ntf3P20181 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Ntf3P20181 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ntf3P20181 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Ntf3P20181 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ntf3P20181 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ntf3P20181 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.19□□□□□ -0.62
Ntf3P20181 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ntf3P20181 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ntf3P20181 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ntf3P20181 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ntf3P20181 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ntf3P20181 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ntf3P20181 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ntf3P20181 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ntf3P20181 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.19□□□□□ -0.62
Ntf3P20181 Gm24420-201ENSMUST00000176676 59 ntBASIC11.19□□□□□ -0.62
Ntf3P20181 Gm9630-201ENSMUST00000178304 885 ntBASIC11.19□□□□□ -0.62
Ntf3P20181 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Ntf3P20181 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Ntf3P20181 Gm17968-201ENSMUST00000194902 784 ntBASIC11.19□□□□□ -0.62
Ntf3P20181 Gm18195-201ENSMUST00000207604 706 ntBASIC11.19□□□□□ -0.62
Ntf3P20181 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.19□□□□□ -0.62
Ntf3P20181 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ntf3P20181 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ntf3P20181 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ntf3P20181 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ntf3P20181 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ntf3P20181 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ntf3P20181 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.19□□□□□ -0.62
Ntf3P20181 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.19□□□□□ -0.62
Ntf3P20181 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ntf3P20181 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.19□□□□□ -0.62
Ntf3P20181 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ntf3P20181 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ntf3P20181 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Ntf3P20181 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ntf3P20181 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ntf3P20181 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ntf3P20181 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ntf3P20181 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ntf3P20181 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ntf3P20181 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ntf3P20181 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ntf3P20181 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.19□□□□□ -0.62
Ntf3P20181 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.18□□□□□ -0.62
Ntf3P20181 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Ntf3P20181 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
Ntf3P20181 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.18□□□□□ -0.62
Ntf3P20181 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ntf3P20181 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ntf3P20181 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ntf3P20181 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ntf3P20181 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ntf3P20181 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms