Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.13□□□□□ -0.47
ApoeP08226 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.12□□□□□ -0.47
ApoeP08226 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ApoeP08226 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.12□□□□□ -0.47
ApoeP08226 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
ApoeP08226 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ApoeP08226 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
ApoeP08226 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
ApoeP08226 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.12□□□□□ -0.47
ApoeP08226 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ApoeP08226 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.12□□□□□ -0.47
ApoeP08226 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ApoeP08226 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
ApoeP08226 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
ApoeP08226 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ApoeP08226 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
ApoeP08226 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ApoeP08226 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
ApoeP08226 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ApoeP08226 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ApoeP08226 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ApoeP08226 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ApoeP08226 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
ApoeP08226 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.12□□□□□ -0.47
ApoeP08226 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ApoeP08226 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ApoeP08226 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ApoeP08226 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.12□□□□□ -0.47
ApoeP08226 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.12□□□□□ -0.47
ApoeP08226 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ApoeP08226 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.12□□□□□ -0.47
ApoeP08226 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.12□□□□□ -0.47
ApoeP08226 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
ApoeP08226 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ApoeP08226 Gm26035-201ENSMUST00000083065 308 ntBASIC12.12□□□□□ -0.47
ApoeP08226 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ApoeP08226 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ApoeP08226 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
ApoeP08226 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
ApoeP08226 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ApoeP08226 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ApoeP08226 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
ApoeP08226 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
ApoeP08226 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
ApoeP08226 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ApoeP08226 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.12□□□□□ -0.47
ApoeP08226 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ApoeP08226 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ApoeP08226 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ApoeP08226 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ApoeP08226 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
ApoeP08226 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ApoeP08226 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ApoeP08226 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ApoeP08226 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ApoeP08226 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ApoeP08226 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ApoeP08226 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ApoeP08226 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ApoeP08226 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.11□□□□□ -0.47
ApoeP08226 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ApoeP08226 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ApoeP08226 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ApoeP08226 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
ApoeP08226 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ApoeP08226 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ApoeP08226 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.11□□□□□ -0.47
ApoeP08226 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ApoeP08226 Gm22175-201ENSMUST00000175007 78 ntBASIC12.11□□□□□ -0.47
ApoeP08226 Gm21854-201ENSMUST00000179901 471 ntBASIC12.11□□□□□ -0.47
ApoeP08226 Gm9522-201ENSMUST00000182394 926 ntBASIC12.11□□□□□ -0.47
ApoeP08226 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.11□□□□□ -0.47
ApoeP08226 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ApoeP08226 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.11□□□□□ -0.47
ApoeP08226 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ApoeP08226 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.11□□□□□ -0.47
ApoeP08226 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ApoeP08226 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ApoeP08226 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ApoeP08226 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ApoeP08226 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ApoeP08226 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ApoeP08226 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ApoeP08226 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ApoeP08226 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ApoeP08226 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ApoeP08226 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ApoeP08226 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.11□□□□□ -0.47
ApoeP08226 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ApoeP08226 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.11□□□□□ -0.47
ApoeP08226 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ApoeP08226 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ApoeP08226 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ApoeP08226 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ApoeP08226 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.1□□□□□ -0.47
ApoeP08226 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
ApoeP08226 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ApoeP08226 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ApoeP08226 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ApoeP08226 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms