Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcnkO88874 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.44□□□□□ -0.58
CcnkO88874 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CcnkO88874 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcnkO88874 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcnkO88874 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CcnkO88874 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcnkO88874 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcnkO88874 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcnkO88874 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CcnkO88874 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcnkO88874 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CcnkO88874 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.44□□□□□ -0.58
CcnkO88874 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcnkO88874 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CcnkO88874 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcnkO88874 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CcnkO88874 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CcnkO88874 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.44□□□□□ -0.58
CcnkO88874 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcnkO88874 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CcnkO88874 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcnkO88874 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcnkO88874 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.43□□□□□ -0.58
CcnkO88874 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcnkO88874 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcnkO88874 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CcnkO88874 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
CcnkO88874 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
CcnkO88874 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CcnkO88874 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcnkO88874 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcnkO88874 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.43□□□□□ -0.58
CcnkO88874 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcnkO88874 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CcnkO88874 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
CcnkO88874 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcnkO88874 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.43□□□□□ -0.58
CcnkO88874 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcnkO88874 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.43□□□□□ -0.58
CcnkO88874 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.43□□□□□ -0.58
CcnkO88874 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
CcnkO88874 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CcnkO88874 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.43□□□□□ -0.58
CcnkO88874 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.43□□□□□ -0.58
CcnkO88874 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.43□□□□□ -0.58
CcnkO88874 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
CcnkO88874 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.43□□□□□ -0.58
CcnkO88874 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.43□□□□□ -0.58
CcnkO88874 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
CcnkO88874 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CcnkO88874 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
CcnkO88874 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcnkO88874 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
CcnkO88874 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CcnkO88874 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
CcnkO88874 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcnkO88874 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CcnkO88874 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
CcnkO88874 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CcnkO88874 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcnkO88874 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.43□□□□□ -0.58
CcnkO88874 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcnkO88874 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcnkO88874 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcnkO88874 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcnkO88874 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcnkO88874 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcnkO88874 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.42□□□□□ -0.58
CcnkO88874 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcnkO88874 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcnkO88874 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcnkO88874 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcnkO88874 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcnkO88874 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CcnkO88874 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcnkO88874 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
CcnkO88874 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.42□□□□□ -0.58
CcnkO88874 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcnkO88874 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
CcnkO88874 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcnkO88874 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
CcnkO88874 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
CcnkO88874 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.42□□□□□ -0.58
CcnkO88874 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.42□□□□□ -0.58
CcnkO88874 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CcnkO88874 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CcnkO88874 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
CcnkO88874 Gm28760-201ENSMUST00000185995 736 ntBASIC11.42□□□□□ -0.58
CcnkO88874 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CcnkO88874 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.42□□□□□ -0.58
CcnkO88874 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.42□□□□□ -0.58
CcnkO88874 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcnkO88874 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
CcnkO88874 Gm5161-201ENSMUST00000075243 853 ntBASIC11.42□□□□□ -0.58
CcnkO88874 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcnkO88874 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcnkO88874 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CcnkO88874 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcnkO88874 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms