Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim1O70400 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim1O70400 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Pdlim1O70400 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim1O70400 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim1O70400 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.68□□□□□ -0.38
Pdlim1O70400 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim1O70400 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.68□□□□□ -0.38
Pdlim1O70400 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim1O70400 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim1O70400 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.68□□□□□ -0.38
Pdlim1O70400 Gm23931-201ENSMUST00000103842 109 ntBASIC12.68□□□□□ -0.38
Pdlim1O70400 Gm5187-201ENSMUST00000117317 991 ntBASIC12.68□□□□□ -0.38
Pdlim1O70400 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.68□□□□□ -0.38
Pdlim1O70400 Gm13492-201ENSMUST00000119772 665 ntBASIC12.68□□□□□ -0.38
Pdlim1O70400 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim1O70400 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.68□□□□□ -0.38
Pdlim1O70400 Gm38092-201ENSMUST00000195600 653 ntBASIC12.68□□□□□ -0.38
Pdlim1O70400 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.68□□□□□ -0.38
Pdlim1O70400 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim1O70400 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim1O70400 Gm5781-201ENSMUST00000219792 443 ntBASIC12.68□□□□□ -0.38
Pdlim1O70400 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.68□□□□□ -0.38
Pdlim1O70400 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim1O70400 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim1O70400 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim1O70400 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim1O70400 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.68□□□□□ -0.38
Pdlim1O70400 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim1O70400 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim1O70400 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim1O70400 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim1O70400 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.68□□□□□ -0.38
Pdlim1O70400 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim1O70400 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Pdlim1O70400 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim1O70400 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim1O70400 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim1O70400 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.67□□□□□ -0.38
Pdlim1O70400 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pdlim1O70400 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.67□□□□□ -0.38
Pdlim1O70400 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim1O70400 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim1O70400 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim1O70400 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim1O70400 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim1O70400 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim1O70400 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.67□□□□□ -0.38
Pdlim1O70400 Gm12742-201ENSMUST00000117326 410 ntBASIC12.67□□□□□ -0.38
Pdlim1O70400 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.67□□□□□ -0.38
Pdlim1O70400 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.67□□□□□ -0.38
Pdlim1O70400 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.67□□□□□ -0.38
Pdlim1O70400 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Pdlim1O70400 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Pdlim1O70400 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.67□□□□□ -0.38
Pdlim1O70400 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.67□□□□□ -0.38
Pdlim1O70400 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim1O70400 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim1O70400 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim1O70400 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim1O70400 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim1O70400 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim1O70400 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim1O70400 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pdlim1O70400 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.67□□□□□ -0.38
Pdlim1O70400 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim1O70400 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim1O70400 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim1O70400 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.67□□□□□ -0.38
Pdlim1O70400 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim1O70400 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim1O70400 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim1O70400 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Pdlim1O70400 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.66□□□□□ -0.38
Pdlim1O70400 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim1O70400 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim1O70400 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim1O70400 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim1O70400 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim1O70400 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim1O70400 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pdlim1O70400 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim1O70400 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim1O70400 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim1O70400 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim1O70400 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim1O70400 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim1O70400 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.66□□□□□ -0.38
Pdlim1O70400 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim1O70400 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim1O70400 Gm24548-201ENSMUST00000158650 108 ntBASIC12.66□□□□□ -0.38
Pdlim1O70400 Gm16296-201ENSMUST00000159905 325 ntBASIC12.66□□□□□ -0.38
Pdlim1O70400 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pdlim1O70400 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim1O70400 Gm6222-202ENSMUST00000182143 629 ntBASIC12.66□□□□□ -0.38
Pdlim1O70400 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim1O70400 Gm37008-201ENSMUST00000195712 319 ntBASIC12.66□□□□□ -0.38
Pdlim1O70400 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.66□□□□□ -0.38
Pdlim1O70400 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.66□□□□□ -0.38
Pdlim1O70400 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms