Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SgceO70258 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SgceO70258 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
SgceO70258 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
SgceO70258 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.49□□□□□ -0.57
SgceO70258 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.49□□□□□ -0.57
SgceO70258 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
SgceO70258 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SgceO70258 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.49□□□□□ -0.57
SgceO70258 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.49□□□□□ -0.57
SgceO70258 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.49□□□□□ -0.57
SgceO70258 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.49□□□□□ -0.57
SgceO70258 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.49□□□□□ -0.57
SgceO70258 Gm9794-201ENSMUST00000202370 423 ntBASIC11.49□□□□□ -0.57
SgceO70258 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Gm5356-201ENSMUST00000093326 615 ntBASIC11.49□□□□□ -0.57
SgceO70258 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
SgceO70258 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.49□□□□□ -0.57
SgceO70258 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SgceO70258 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
SgceO70258 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
SgceO70258 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SgceO70258 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.49□□□□□ -0.57
SgceO70258 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.49□□□□□ -0.57
SgceO70258 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgceO70258 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgceO70258 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgceO70258 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgceO70258 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SgceO70258 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgceO70258 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
SgceO70258 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgceO70258 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgceO70258 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgceO70258 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgceO70258 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.48□□□□□ -0.57
SgceO70258 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SgceO70258 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.48□□□□□ -0.57
SgceO70258 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SgceO70258 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SgceO70258 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.48□□□□□ -0.57
SgceO70258 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.48□□□□□ -0.57
SgceO70258 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.48□□□□□ -0.57
SgceO70258 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.48□□□□□ -0.57
SgceO70258 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.48□□□□□ -0.57
SgceO70258 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgceO70258 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgceO70258 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgceO70258 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgceO70258 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.48□□□□□ -0.57
SgceO70258 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgceO70258 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgceO70258 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgceO70258 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SgceO70258 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgceO70258 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgceO70258 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
SgceO70258 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.48□□□□□ -0.57
SgceO70258 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgceO70258 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgceO70258 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgceO70258 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SgceO70258 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgceO70258 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.48□□□□□ -0.57
SgceO70258 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
SgceO70258 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgceO70258 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgceO70258 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgceO70258 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
SgceO70258 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgceO70258 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms