Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Ldb2O55203 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.73□□□□□ -0.37
Ldb2O55203 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ldb2O55203 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ldb2O55203 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
Ldb2O55203 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.72□□□□□ -0.37
Ldb2O55203 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 Gm12384-201ENSMUST00000119228 919 ntBASIC12.72□□□□□ -0.37
Ldb2O55203 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Ldb2O55203 Gm16296-201ENSMUST00000159905 325 ntBASIC12.72□□□□□ -0.37
Ldb2O55203 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.72□□□□□ -0.37
Ldb2O55203 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.72□□□□□ -0.37
Ldb2O55203 Gm38092-201ENSMUST00000195600 653 ntBASIC12.72□□□□□ -0.37
Ldb2O55203 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.72□□□□□ -0.37
Ldb2O55203 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Ldb2O55203 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ldb2O55203 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ldb2O55203 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.72□□□□□ -0.37
Ldb2O55203 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.72□□□□□ -0.37
Ldb2O55203 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ldb2O55203 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ldb2O55203 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ldb2O55203 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ldb2O55203 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Ldb2O55203 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ldb2O55203 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ldb2O55203 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.71□□□□□ -0.37
Ldb2O55203 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Ldb2O55203 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Ldb2O55203 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ldb2O55203 Gm13226-201ENSMUST00000117838 404 ntBASIC12.71□□□□□ -0.37
Ldb2O55203 Gm14660-201ENSMUST00000119809 575 ntBASIC12.71□□□□□ -0.37
Ldb2O55203 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Ldb2O55203 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Ldb2O55203 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.71□□□□□ -0.37
Ldb2O55203 Gm27731-201ENSMUST00000185192 107 ntBASIC12.71□□□□□ -0.37
Ldb2O55203 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.71□□□□□ -0.37
Ldb2O55203 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ldb2O55203 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ldb2O55203 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ldb2O55203 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ldb2O55203 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ldb2O55203 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ldb2O55203 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ldb2O55203 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ldb2O55203 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ldb2O55203 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ldb2O55203 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Ldb2O55203 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Ldb2O55203 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Ldb2O55203 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ldb2O55203 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ldb2O55203 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Ldb2O55203 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ldb2O55203 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.7□□□□□ -0.38
Ldb2O55203 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb2O55203 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb2O55203 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb2O55203 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb2O55203 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb2O55203 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb2O55203 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb2O55203 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb2O55203 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.7□□□□□ -0.38
Ldb2O55203 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb2O55203 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb2O55203 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb2O55203 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb2O55203 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb2O55203 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb2O55203 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.7□□□□□ -0.38
Ldb2O55203 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ldb2O55203 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.7□□□□□ -0.38
Ldb2O55203 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms