Protein–RNA interactions for Protein: F8VQ70

Scaper, S phase cyclin A-associated protein in the ER, mousemouse

Known RBP Predictions only

Length 1,398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ScaperF8VQ70 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ScaperF8VQ70 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
ScaperF8VQ70 Gm11930-201ENSMUST00000117788 190 ntBASIC16.27■□□□□ 0.2
ScaperF8VQ70 Gm4760-201ENSMUST00000119663 1030 ntBASIC16.27■□□□□ 0.2
ScaperF8VQ70 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC16.27■□□□□ 0.2
ScaperF8VQ70 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ScaperF8VQ70 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ScaperF8VQ70 Gm27046-201ENSMUST00000182160 463 ntBASIC16.27■□□□□ 0.2
ScaperF8VQ70 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ScaperF8VQ70 Gm38297-201ENSMUST00000195122 1057 ntBASIC16.27■□□□□ 0.2
ScaperF8VQ70 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ScaperF8VQ70 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC16.27■□□□□ 0.2
ScaperF8VQ70 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ScaperF8VQ70 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ScaperF8VQ70 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ScaperF8VQ70 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ScaperF8VQ70 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ScaperF8VQ70 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ScaperF8VQ70 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ScaperF8VQ70 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ScaperF8VQ70 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ScaperF8VQ70 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ScaperF8VQ70 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ScaperF8VQ70 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ScaperF8VQ70 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ScaperF8VQ70 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ScaperF8VQ70 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ScaperF8VQ70 Gm27194-201ENSMUST00000175753 2936 ntBASIC16.27■□□□□ 0.19
ScaperF8VQ70 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ScaperF8VQ70 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
ScaperF8VQ70 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ScaperF8VQ70 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
ScaperF8VQ70 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ScaperF8VQ70 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
ScaperF8VQ70 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ScaperF8VQ70 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC16.27■□□□□ 0.19
ScaperF8VQ70 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ScaperF8VQ70 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ScaperF8VQ70 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
ScaperF8VQ70 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ScaperF8VQ70 Gm7114-201ENSMUST00000190159 1789 ntBASIC16.27■□□□□ 0.19
ScaperF8VQ70 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ScaperF8VQ70 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ScaperF8VQ70 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ScaperF8VQ70 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ScaperF8VQ70 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ScaperF8VQ70 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC16.26■□□□□ 0.19
ScaperF8VQ70 Gm12502-201ENSMUST00000120197 444 ntBASIC16.26■□□□□ 0.19
ScaperF8VQ70 Gm2546-201ENSMUST00000182630 991 ntBASIC16.26■□□□□ 0.19
ScaperF8VQ70 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC16.26■□□□□ 0.19
ScaperF8VQ70 Gm9004-201ENSMUST00000218739 1222 ntBASIC16.26■□□□□ 0.19
ScaperF8VQ70 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ScaperF8VQ70 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ScaperF8VQ70 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ScaperF8VQ70 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ScaperF8VQ70 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ScaperF8VQ70 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
ScaperF8VQ70 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ScaperF8VQ70 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
ScaperF8VQ70 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ScaperF8VQ70 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ScaperF8VQ70 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
ScaperF8VQ70 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ScaperF8VQ70 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ScaperF8VQ70 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ScaperF8VQ70 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ScaperF8VQ70 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ScaperF8VQ70 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ScaperF8VQ70 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ScaperF8VQ70 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ScaperF8VQ70 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ScaperF8VQ70 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC16.26■□□□□ 0.19
ScaperF8VQ70 Gm26361-201ENSMUST00000158868 186 ntBASIC16.26■□□□□ 0.19
ScaperF8VQ70 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ScaperF8VQ70 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ScaperF8VQ70 Gm8885-201ENSMUST00000189382 598 ntBASIC16.26■□□□□ 0.19
ScaperF8VQ70 Gm37835-201ENSMUST00000193305 361 ntBASIC16.26■□□□□ 0.19
ScaperF8VQ70 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ScaperF8VQ70 Gm8385-201ENSMUST00000058999 643 ntBASIC16.26■□□□□ 0.19
ScaperF8VQ70 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ScaperF8VQ70 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ScaperF8VQ70 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
ScaperF8VQ70 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ScaperF8VQ70 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ScaperF8VQ70 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
ScaperF8VQ70 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ScaperF8VQ70 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ScaperF8VQ70 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ScaperF8VQ70 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ScaperF8VQ70 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ScaperF8VQ70 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
ScaperF8VQ70 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ScaperF8VQ70 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ScaperF8VQ70 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms