Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Shank1D3YZU1 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Gm12380-201ENSMUST00000119012 544 ntBASIC11.47□□□□□ -0.57
Shank1D3YZU1 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.47□□□□□ -0.57
Shank1D3YZU1 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Gm10752-201ENSMUST00000218348 729 ntBASIC11.47□□□□□ -0.57
Shank1D3YZU1 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.47□□□□□ -0.57
Shank1D3YZU1 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.47□□□□□ -0.57
Shank1D3YZU1 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Gm17391-201ENSMUST00000171036 126 ntBASIC11.47□□□□□ -0.57
Shank1D3YZU1 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.47□□□□□ -0.57
Shank1D3YZU1 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.47□□□□□ -0.57
Shank1D3YZU1 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.47□□□□□ -0.57
Shank1D3YZU1 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Ntng1-201ENSMUST00000051253 327 ntBASIC11.47□□□□□ -0.57
Shank1D3YZU1 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.47□□□□□ -0.57
Shank1D3YZU1 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Shank1D3YZU1 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Shank1D3YZU1 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Shank1D3YZU1 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Shank1D3YZU1 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Shank1D3YZU1 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Shank1D3YZU1 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Shank1D3YZU1 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Shank1D3YZU1 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Shank1D3YZU1 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Shank1D3YZU1 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Shank1D3YZU1 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Shank1D3YZU1 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Shank1D3YZU1 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Shank1D3YZU1 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Shank1D3YZU1 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Shank1D3YZU1 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Shank1D3YZU1 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Shank1D3YZU1 Gm13296-201ENSMUST00000117854 997 ntBASIC11.46□□□□□ -0.57
Shank1D3YZU1 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.46□□□□□ -0.57
Shank1D3YZU1 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.46□□□□□ -0.57
Shank1D3YZU1 Gm11597-201ENSMUST00000121423 964 ntBASIC11.46□□□□□ -0.57
Shank1D3YZU1 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Shank1D3YZU1 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.46□□□□□ -0.57
Shank1D3YZU1 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Shank1D3YZU1 Gm19353-201ENSMUST00000184561 445 ntBASIC11.46□□□□□ -0.57
Shank1D3YZU1 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.46□□□□□ -0.57
Shank1D3YZU1 Gm44651-201ENSMUST00000207343 372 ntBASIC11.46□□□□□ -0.57
Shank1D3YZU1 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.46□□□□□ -0.57
Shank1D3YZU1 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.46□□□□□ -0.57
Shank1D3YZU1 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.46□□□□□ -0.57
Shank1D3YZU1 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Shank1D3YZU1 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Shank1D3YZU1 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Shank1D3YZU1 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.46□□□□□ -0.58
Shank1D3YZU1 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Shank1D3YZU1 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Shank1D3YZU1 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms