Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Mir339-201ENSMUST00000083659 96 ntBASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cldn9Q9Z0S7 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cldn9Q9Z0S7 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Gm14921-201ENSMUST00000118643 908 ntBASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Gm14704-201ENSMUST00000120300 874 ntBASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn9Q9Z0S7 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Gm22331-201ENSMUST00000158066 136 ntBASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Gm17208-201ENSMUST00000168388 535 ntBASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldn9Q9Z0S7 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cldn9Q9Z0S7 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms