Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Scn8aQ9WTU3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn8aQ9WTU3 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Gm45186-201ENSMUST00000206874 478 ntBASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Gm12058-201ENSMUST00000118614 437 ntBASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.8□□□□□ -0.36
Scn8aQ9WTU3 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms