Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Gm14644-201ENSMUST00000116671 647 ntBASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Gm12291-201ENSMUST00000121627 311 ntBASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Mir339-201ENSMUST00000083659 96 ntBASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-4Q9EQM3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Gm11941-201ENSMUST00000119904 610 ntBASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Gm12134-201ENSMUST00000122109 520 ntBASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Gm7666-201ENSMUST00000146631 819 ntBASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Gm10076-201ENSMUST00000073238 384 ntBASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-4Q9EQM3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-4Q9EQM3 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-4Q9EQM3 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.09□□□□□ -0.31
Nkx2-4Q9EQM3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-4Q9EQM3 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-4Q9EQM3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.09□□□□□ -0.31
Nkx2-4Q9EQM3 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-4Q9EQM3 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.09□□□□□ -0.31
Nkx2-4Q9EQM3 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.09□□□□□ -0.31
Nkx2-4Q9EQM3 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-4Q9EQM3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-4Q9EQM3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-4Q9EQM3 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Nkx2-4Q9EQM3 Gm12501-201ENSMUST00000119163 529 ntBASIC13.09□□□□□ -0.31
Nkx2-4Q9EQM3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-4Q9EQM3 Gm16296-201ENSMUST00000159905 325 ntBASIC13.09□□□□□ -0.31
Nkx2-4Q9EQM3 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.09□□□□□ -0.31
Nkx2-4Q9EQM3 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.09□□□□□ -0.31
Nkx2-4Q9EQM3 Gm25951-201ENSMUST00000175330 64 ntBASIC13.09□□□□□ -0.31
Nkx2-4Q9EQM3 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms