Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl39lQ9CQD0 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl39lQ9CQD0 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl39lQ9CQD0 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl39lQ9CQD0 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl39lQ9CQD0 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC8.32□□□□□ -1.08
Rpl39lQ9CQD0 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl39lQ9CQD0 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl39lQ9CQD0 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl39lQ9CQD0 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl39lQ9CQD0 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl39lQ9CQD0 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl39lQ9CQD0 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC8.32□□□□□ -1.08
Rpl39lQ9CQD0 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl39lQ9CQD0 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC8.32□□□□□ -1.08
Rpl39lQ9CQD0 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
Rpl39lQ9CQD0 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl39lQ9CQD0 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl39lQ9CQD0 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Rpl39lQ9CQD0 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
Rpl39lQ9CQD0 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Gm24589-201ENSMUST00000116692 94 ntBASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Mir5131-201ENSMUST00000175426 93 ntBASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Gm24420-201ENSMUST00000176676 59 ntBASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Gm28033-201ENSMUST00000184224 96 ntBASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Gm45684-201ENSMUST00000210244 1571 ntBASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl39lQ9CQD0 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39lQ9CQD0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39lQ9CQD0 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39lQ9CQD0 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39lQ9CQD0 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC8.3□□□□□ -1.08
Rpl39lQ9CQD0 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39lQ9CQD0 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39lQ9CQD0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39lQ9CQD0 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39lQ9CQD0 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39lQ9CQD0 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC8.3□□□□□ -1.08
Rpl39lQ9CQD0 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39lQ9CQD0 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39lQ9CQD0 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39lQ9CQD0 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms