Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gm17794-201ENSMUST00000220252 955 ntBASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Gm18473-201ENSMUST00000220543 868 ntBASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp1b1Q99LU0 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Chmp1b1Q99LU0 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Chmp1b1Q99LU0 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Gm2495-201ENSMUST00000191160 466 ntBASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Gm18187-201ENSMUST00000196476 984 ntBASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp1b1Q99LU0 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Gm6458-201ENSMUST00000211573 635 ntBASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms