Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Mir686-201ENSMUST00000102174 109 ntBASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SfpqQ8VIJ6 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SfpqQ8VIJ6 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SfpqQ8VIJ6 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
SfpqQ8VIJ6 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SfpqQ8VIJ6 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
SfpqQ8VIJ6 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.52□□□□□ -0.24
SfpqQ8VIJ6 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SfpqQ8VIJ6 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.52□□□□□ -0.24
SfpqQ8VIJ6 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SfpqQ8VIJ6 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
SfpqQ8VIJ6 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SfpqQ8VIJ6 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
SfpqQ8VIJ6 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SfpqQ8VIJ6 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SfpqQ8VIJ6 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SfpqQ8VIJ6 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SfpqQ8VIJ6 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SfpqQ8VIJ6 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.52□□□□□ -0.25
SfpqQ8VIJ6 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SfpqQ8VIJ6 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SfpqQ8VIJ6 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SfpqQ8VIJ6 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.52□□□□□ -0.25
SfpqQ8VIJ6 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SfpqQ8VIJ6 Gm6458-201ENSMUST00000211573 635 ntBASIC13.52□□□□□ -0.25
SfpqQ8VIJ6 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.52□□□□□ -0.25
SfpqQ8VIJ6 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SfpqQ8VIJ6 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SfpqQ8VIJ6 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SfpqQ8VIJ6 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SfpqQ8VIJ6 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.52□□□□□ -0.25
SfpqQ8VIJ6 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SfpqQ8VIJ6 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 Matn2-203ENSMUST00000226766 3252 ntBASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 Gm14719-201ENSMUST00000121891 340 ntBASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SfpqQ8VIJ6 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SfpqQ8VIJ6 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SfpqQ8VIJ6 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SfpqQ8VIJ6 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SfpqQ8VIJ6 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SfpqQ8VIJ6 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SfpqQ8VIJ6 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SfpqQ8VIJ6 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SfpqQ8VIJ6 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms