Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rprd1aQ8VDS4 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rprd1aQ8VDS4 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Gm19184-201ENSMUST00000196798 928 ntBASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Gm43438-201ENSMUST00000198133 379 ntBASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Gm43630-201ENSMUST00000201550 776 ntBASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Gm45880-201ENSMUST00000213041 853 ntBASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Gm10478-201ENSMUST00000084451 396 ntBASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rprd1aQ8VDS4 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Gm16379-201ENSMUST00000161469 348 ntBASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Gm22121-201ENSMUST00000175148 54 ntBASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Gm6222-202ENSMUST00000182143 629 ntBASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Gm8762-201ENSMUST00000193486 339 ntBASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Gm9899-201ENSMUST00000065519 555 ntBASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rprd1aQ8VDS4 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms