Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rnf8Q8VC56 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf8Q8VC56 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf8Q8VC56 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Gm45841-201ENSMUST00000207700 164 ntBASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf8Q8VC56 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Rnf8Q8VC56 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rnf8Q8VC56 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rnf8Q8VC56 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Gm13323-201ENSMUST00000120245 1151 ntBASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf8Q8VC56 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf8Q8VC56 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms