Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacnb1Q8R3Z5 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacnb1Q8R3Z5 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cacnb1Q8R3Z5 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacnb1Q8R3Z5 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacnb1Q8R3Z5 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.28■□□□□ 0.04
Cacnb1Q8R3Z5 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacnb1Q8R3Z5 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.28■□□□□ 0.04
Cacnb1Q8R3Z5 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacnb1Q8R3Z5 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacnb1Q8R3Z5 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cacnb1Q8R3Z5 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Gm15152-201ENSMUST00000121540 394 ntBASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Gm14800-201ENSMUST00000122084 1272 ntBASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Gm25807-201ENSMUST00000122783 305 ntBASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Gm4804-201ENSMUST00000182234 999 ntBASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Gm2707-201ENSMUST00000188979 714 ntBASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Gm43748-201ENSMUST00000202329 1233 ntBASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Gm44855-201ENSMUST00000205725 362 ntBASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Gm4803-201ENSMUST00000218729 1279 ntBASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 AC105408.1-201ENSMUST00000227771 802 ntBASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Gm2423-201ENSMUST00000074863 733 ntBASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Cacnb1Q8R3Z5 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacnb1Q8R3Z5 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacnb1Q8R3Z5 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacnb1Q8R3Z5 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cacnb1Q8R3Z5 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.27■□□□□ 0.03
Cacnb1Q8R3Z5 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacnb1Q8R3Z5 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacnb1Q8R3Z5 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Cacnb1Q8R3Z5 Gm38104-201ENSMUST00000195121 1895 ntBASIC15.27■□□□□ 0.03
Cacnb1Q8R3Z5 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacnb1Q8R3Z5 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacnb1Q8R3Z5 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacnb1Q8R3Z5 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Gm24694-201ENSMUST00000180054 110 ntBASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Gm27663-201ENSMUST00000184839 110 ntBASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Gm43774-201ENSMUST00000196327 878 ntBASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Gm6218-201ENSMUST00000219812 628 ntBASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 AC153152.2-201ENSMUST00000223165 959 ntBASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC15.26■□□□□ 0.03
Cacnb1Q8R3Z5 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms