Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim52Q8CDV4 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim52Q8CDV4 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim52Q8CDV4 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim52Q8CDV4 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trim52Q8CDV4 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trim52Q8CDV4 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim52Q8CDV4 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim52Q8CDV4 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trim52Q8CDV4 Gm24231-201ENSMUST00000104315 133 ntBASIC15.74■□□□□ 0.11
Trim52Q8CDV4 Gm23200-201ENSMUST00000104379 132 ntBASIC15.74■□□□□ 0.11
Trim52Q8CDV4 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC15.74■□□□□ 0.11
Trim52Q8CDV4 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC15.74■□□□□ 0.11
Trim52Q8CDV4 Gm24749-201ENSMUST00000157838 343 ntBASIC15.74■□□□□ 0.11
Trim52Q8CDV4 Mir6927-201ENSMUST00000184494 71 ntBASIC15.74■□□□□ 0.11
Trim52Q8CDV4 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim52Q8CDV4 Gm19994-201ENSMUST00000217086 586 ntBASIC15.74■□□□□ 0.11
Trim52Q8CDV4 AC163667.3-201ENSMUST00000225774 222 ntBASIC15.74■□□□□ 0.11
Trim52Q8CDV4 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC15.74■□□□□ 0.11
Trim52Q8CDV4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim52Q8CDV4 Retreg1-206ENSMUST00000228306 1430 ntBASIC15.74■□□□□ 0.11
Trim52Q8CDV4 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC15.74■□□□□ 0.11
Trim52Q8CDV4 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim52Q8CDV4 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim52Q8CDV4 Matn2-206ENSMUST00000228570 2798 ntBASIC15.74■□□□□ 0.11
Trim52Q8CDV4 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim52Q8CDV4 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim52Q8CDV4 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim52Q8CDV4 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.74■□□□□ 0.11
Trim52Q8CDV4 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Gm23119-201ENSMUST00000158610 140 ntBASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Gm28450-201ENSMUST00000187349 638 ntBASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Gm43138-201ENSMUST00000199123 708 ntBASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Gm45433-201ENSMUST00000209386 247 ntBASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Gm19208-201ENSMUST00000213861 912 ntBASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim52Q8CDV4 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim52Q8CDV4 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC15.72■□□□□ 0.11
Trim52Q8CDV4 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim52Q8CDV4 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.72■□□□□ 0.11
Trim52Q8CDV4 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim52Q8CDV4 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim52Q8CDV4 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.72■□□□□ 0.11
Trim52Q8CDV4 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC15.72■□□□□ 0.11
Trim52Q8CDV4 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Trim52Q8CDV4 B9d1os-201ENSMUST00000137010 674 ntBASIC15.72■□□□□ 0.11
Trim52Q8CDV4 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trim52Q8CDV4 Gm9022-201ENSMUST00000182482 992 ntBASIC15.72■□□□□ 0.11
Trim52Q8CDV4 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim52Q8CDV4 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC15.72■□□□□ 0.11
Trim52Q8CDV4 Aprt-ps-201ENSMUST00000212311 505 ntBASIC15.72■□□□□ 0.11
Trim52Q8CDV4 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim52Q8CDV4 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim52Q8CDV4 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trim52Q8CDV4 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim52Q8CDV4 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Trim52Q8CDV4 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim52Q8CDV4 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim52Q8CDV4 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim52Q8CDV4 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim52Q8CDV4 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim52Q8CDV4 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim52Q8CDV4 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.72■□□□□ 0.11
Trim52Q8CDV4 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trim52Q8CDV4 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim52Q8CDV4 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim52Q8CDV4 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim52Q8CDV4 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim52Q8CDV4 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim52Q8CDV4 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms