Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps53Q8CCB4 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.96□□□□□ -0.01
Vps53Q8CCB4 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.96□□□□□ -0.01
Vps53Q8CCB4 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.96□□□□□ -0.01
Vps53Q8CCB4 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps53Q8CCB4 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vps53Q8CCB4 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Vps53Q8CCB4 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vps53Q8CCB4 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vps53Q8CCB4 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Vps53Q8CCB4 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps53Q8CCB4 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps53Q8CCB4 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vps53Q8CCB4 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Vps53Q8CCB4 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vps53Q8CCB4 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Vps53Q8CCB4 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps53Q8CCB4 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps53Q8CCB4 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Vps53Q8CCB4 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps53Q8CCB4 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps53Q8CCB4 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps53Q8CCB4 Gm13350-201ENSMUST00000120519 479 ntBASIC14.95□□□□□ -0.02
Vps53Q8CCB4 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vps53Q8CCB4 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.95□□□□□ -0.02
Vps53Q8CCB4 Gm27516-201ENSMUST00000184237 98 ntBASIC14.95□□□□□ -0.02
Vps53Q8CCB4 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.95□□□□□ -0.02
Vps53Q8CCB4 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Vps53Q8CCB4 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.95□□□□□ -0.02
Vps53Q8CCB4 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps53Q8CCB4 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps53Q8CCB4 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.95□□□□□ -0.02
Vps53Q8CCB4 Gm26315-201ENSMUST00000083890 321 ntBASIC14.95□□□□□ -0.02
Vps53Q8CCB4 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps53Q8CCB4 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vps53Q8CCB4 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps53Q8CCB4 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vps53Q8CCB4 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps53Q8CCB4 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vps53Q8CCB4 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps53Q8CCB4 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Gm22018-201ENSMUST00000104357 131 ntBASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Gm45930-201ENSMUST00000221330 292 ntBASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps53Q8CCB4 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps53Q8CCB4 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps53Q8CCB4 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps53Q8CCB4 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps53Q8CCB4 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps53Q8CCB4 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vps53Q8CCB4 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Vps53Q8CCB4 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Vps53Q8CCB4 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC14.93□□□□□ -0.02
Vps53Q8CCB4 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.93□□□□□ -0.02
Vps53Q8CCB4 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps53Q8CCB4 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms