Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
SprnQ8BWU1 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Gm12091-201ENSMUST00000146791 830 ntBASIC11.33□□□□□ -0.6
SprnQ8BWU1 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.33□□□□□ -0.6
SprnQ8BWU1 Gm43094-201ENSMUST00000196549 921 ntBASIC11.33□□□□□ -0.6
SprnQ8BWU1 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Gm9908-201ENSMUST00000211534 448 ntBASIC11.33□□□□□ -0.6
SprnQ8BWU1 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.33□□□□□ -0.6
SprnQ8BWU1 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.33□□□□□ -0.6
SprnQ8BWU1 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.33□□□□□ -0.6
SprnQ8BWU1 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.33□□□□□ -0.6
SprnQ8BWU1 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.33□□□□□ -0.6
SprnQ8BWU1 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.33□□□□□ -0.6
SprnQ8BWU1 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
SprnQ8BWU1 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SprnQ8BWU1 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
SprnQ8BWU1 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SprnQ8BWU1 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SprnQ8BWU1 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.32□□□□□ -0.6
SprnQ8BWU1 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.32□□□□□ -0.6
SprnQ8BWU1 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
SprnQ8BWU1 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SprnQ8BWU1 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.32□□□□□ -0.6
SprnQ8BWU1 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SprnQ8BWU1 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 103.2 ms