Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Depdc1bQ8BH88 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Depdc1bQ8BH88 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Depdc1bQ8BH88 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Depdc1bQ8BH88 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Depdc1bQ8BH88 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.96□□□□□ -0.17
Depdc1bQ8BH88 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Depdc1bQ8BH88 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.96□□□□□ -0.17
Depdc1bQ8BH88 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.96□□□□□ -0.17
Depdc1bQ8BH88 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.96□□□□□ -0.17
Depdc1bQ8BH88 Gm6458-201ENSMUST00000211573 635 ntBASIC13.96□□□□□ -0.17
Depdc1bQ8BH88 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Depdc1bQ8BH88 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Depdc1bQ8BH88 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Depdc1bQ8BH88 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Depdc1bQ8BH88 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Depdc1bQ8BH88 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Depdc1bQ8BH88 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.96□□□□□ -0.18
Depdc1bQ8BH88 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Depdc1bQ8BH88 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Depdc1bQ8BH88 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Depdc1bQ8BH88 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Depdc1bQ8BH88 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Depdc1bQ8BH88 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Depdc1bQ8BH88 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.96□□□□□ -0.18
Depdc1bQ8BH88 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Depdc1bQ8BH88 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Gm11978-201ENSMUST00000122315 466 ntBASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Gm5370-201ENSMUST00000187187 574 ntBASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Gm44069-201ENSMUST00000204898 506 ntBASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Depdc1bQ8BH88 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 Gm27331-201ENSMUST00000183705 60 ntBASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 Mir6420-201ENSMUST00000185032 102 ntBASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depdc1bQ8BH88 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Depdc1bQ8BH88 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Depdc1bQ8BH88 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.93□□□□□ -0.18
Depdc1bQ8BH88 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms