Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Gm12943-201ENSMUST00000119616 210 ntBASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Gm44958-201ENSMUST00000203734 736 ntBASIC10.8□□□□□ -0.68
Ubr5Q80TP3 CT573086.4-201ENSMUST00000226729 342 ntBASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Gm4604-201ENSMUST00000025040 390 ntBASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Gm11511-201ENSMUST00000118146 540 ntBASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Gm29410-201ENSMUST00000188383 694 ntBASIC10.8□□□□□ -0.68
Ubr5Q80TP3 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC10.8□□□□□ -0.68
Ubr5Q80TP3 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Gm11960-202ENSMUST00000181063 2858 ntBASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr5Q80TP3 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Gm4811-201ENSMUST00000220879 1220 ntBASIC10.79□□□□□ -0.68
Ubr5Q80TP3 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Gm12579-201ENSMUST00000118040 783 ntBASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.79□□□□□ -0.68
Ubr5Q80TP3 AC129308.3-201ENSMUST00000225652 524 ntBASIC10.79□□□□□ -0.68
Ubr5Q80TP3 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Gm14752-201ENSMUST00000120719 2075 ntBASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Ubr5Q80TP3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms