Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Gm45598-202ENSMUST00000210719 986 ntBASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Snrnp40Q6PE01 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Gm29615-201ENSMUST00000185371 697 ntBASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Gm28224-201ENSMUST00000186078 697 ntBASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Gm29001-201ENSMUST00000186177 697 ntBASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Gm28292-201ENSMUST00000186593 697 ntBASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Gm28101-201ENSMUST00000187608 697 ntBASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Gm29076-201ENSMUST00000187689 697 ntBASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Gm28302-201ENSMUST00000187931 697 ntBASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Gm28646-201ENSMUST00000188220 697 ntBASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Gm28205-201ENSMUST00000189177 697 ntBASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Gm29032-201ENSMUST00000189797 697 ntBASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Gm28695-201ENSMUST00000190300 697 ntBASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Gm37448-201ENSMUST00000192795 697 ntBASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Gm37666-201ENSMUST00000194110 866 ntBASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Snrnp40Q6PE01 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.25□□□□□ -0.61
Snrnp40Q6PE01 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms