Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Gm14150-201ENSMUST00000122404 1354 ntBASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Gm42682-201ENSMUST00000198349 1265 ntBASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Chd4Q6PDQ2 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chd4Q6PDQ2 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Chd4Q6PDQ2 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd4Q6PDQ2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd4Q6PDQ2 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd4Q6PDQ2 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd4Q6PDQ2 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Chd4Q6PDQ2 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd4Q6PDQ2 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd4Q6PDQ2 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC16.42■□□□□ 0.22
Chd4Q6PDQ2 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC16.42■□□□□ 0.22
Chd4Q6PDQ2 Gm13035-201ENSMUST00000117496 342 ntBASIC16.42■□□□□ 0.22
Chd4Q6PDQ2 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC16.42■□□□□ 0.22
Chd4Q6PDQ2 Gm5523-201ENSMUST00000180415 997 ntBASIC16.42■□□□□ 0.22
Chd4Q6PDQ2 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Chd4Q6PDQ2 Gm21811-201ENSMUST00000096485 930 ntBASIC16.42■□□□□ 0.22
Chd4Q6PDQ2 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.42■□□□□ 0.22
Chd4Q6PDQ2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd4Q6PDQ2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd4Q6PDQ2 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chd4Q6PDQ2 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC16.42■□□□□ 0.22
Chd4Q6PDQ2 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd4Q6PDQ2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd4Q6PDQ2 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd4Q6PDQ2 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd4Q6PDQ2 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Gm11509-201ENSMUST00000117358 325 ntBASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Gm3332-201ENSMUST00000189337 928 ntBASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Gm38228-201ENSMUST00000193169 1293 ntBASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Gm45118-201ENSMUST00000208928 825 ntBASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Gm6580-201ENSMUST00000117504 1357 ntBASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd4Q6PDQ2 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chd4Q6PDQ2 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC16.4■□□□□ 0.22
Chd4Q6PDQ2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Chd4Q6PDQ2 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd4Q6PDQ2 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Chd4Q6PDQ2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Chd4Q6PDQ2 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd4Q6PDQ2 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd4Q6PDQ2 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chd4Q6PDQ2 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC16.4■□□□□ 0.22
Chd4Q6PDQ2 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chd4Q6PDQ2 Gm24514-201ENSMUST00000174961 285 ntBASIC16.4■□□□□ 0.22
Chd4Q6PDQ2 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC16.4■□□□□ 0.22
Chd4Q6PDQ2 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Chd4Q6PDQ2 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms