Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
AtmQ62388 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.82□□□□□ -0.52
AtmQ62388 Gm4157-201ENSMUST00000211647 679 ntBASIC11.82□□□□□ -0.52
AtmQ62388 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
AtmQ62388 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.82□□□□□ -0.52
AtmQ62388 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
AtmQ62388 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.82□□□□□ -0.52
AtmQ62388 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC11.82□□□□□ -0.52
AtmQ62388 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Gm3283-201ENSMUST00000199319 1350 ntBASIC11.82□□□□□ -0.52
AtmQ62388 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
AtmQ62388 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
AtmQ62388 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
AtmQ62388 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
AtmQ62388 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Gm12196-201ENSMUST00000120954 262 ntBASIC11.82□□□□□ -0.52
AtmQ62388 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.82□□□□□ -0.52
AtmQ62388 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.82□□□□□ -0.52
AtmQ62388 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
AtmQ62388 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
AtmQ62388 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
AtmQ62388 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
AtmQ62388 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
AtmQ62388 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AtmQ62388 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
AtmQ62388 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
AtmQ62388 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AtmQ62388 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.81□□□□□ -0.52
AtmQ62388 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
AtmQ62388 Gm22133-201ENSMUST00000102082 109 ntBASIC11.81□□□□□ -0.52
AtmQ62388 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
AtmQ62388 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.81□□□□□ -0.52
AtmQ62388 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
AtmQ62388 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.81□□□□□ -0.52
AtmQ62388 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AtmQ62388 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AtmQ62388 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AtmQ62388 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AtmQ62388 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AtmQ62388 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
AtmQ62388 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.81□□□□□ -0.52
AtmQ62388 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AtmQ62388 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AtmQ62388 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
AtmQ62388 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AtmQ62388 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
AtmQ62388 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AtmQ62388 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.81□□□□□ -0.52
AtmQ62388 Gm14219-201ENSMUST00000120414 288 ntBASIC11.81□□□□□ -0.52
AtmQ62388 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.81□□□□□ -0.52
AtmQ62388 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AtmQ62388 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
AtmQ62388 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.81□□□□□ -0.52
AtmQ62388 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.81□□□□□ -0.52
AtmQ62388 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
AtmQ62388 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
AtmQ62388 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AtmQ62388 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AtmQ62388 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
AtmQ62388 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
AtmQ62388 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
AtmQ62388 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
AtmQ62388 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
AtmQ62388 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
AtmQ62388 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AtmQ62388 Gm11956-201ENSMUST00000119525 512 ntBASIC11.8□□□□□ -0.52
AtmQ62388 Gm5909-201ENSMUST00000119768 1281 ntBASIC11.8□□□□□ -0.52
AtmQ62388 Gm11836-201ENSMUST00000121022 441 ntBASIC11.8□□□□□ -0.52
AtmQ62388 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AtmQ62388 Gm15744-201ENSMUST00000161734 213 ntBASIC11.8□□□□□ -0.52
AtmQ62388 Gm26989-201ENSMUST00000182608 749 ntBASIC11.8□□□□□ -0.52
AtmQ62388 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
AtmQ62388 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
AtmQ62388 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms