Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5d-4Q5R1F6 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Trav5d-4Q5R1F6 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav5d-4Q5R1F6 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav5d-4Q5R1F6 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav5d-4Q5R1F6 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav5d-4Q5R1F6 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
Trav5d-4Q5R1F6 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav5d-4Q5R1F6 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav5d-4Q5R1F6 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Gm8213-201ENSMUST00000118191 441 ntBASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Gm11803-201ENSMUST00000119966 444 ntBASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Gm12490-201ENSMUST00000120255 560 ntBASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Gm13123-201ENSMUST00000122173 492 ntBASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Gm10156-201ENSMUST00000122364 462 ntBASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Mir1894-201ENSMUST00000122802 81 ntBASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5d-4Q5R1F6 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Gm27892-201ENSMUST00000185017 106 ntBASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Gm37922-201ENSMUST00000195596 455 ntBASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5d-4Q5R1F6 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11□□□□□ -0.65
Trav5d-4Q5R1F6 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms