Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Shisa3Q3UPR0 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa3Q3UPR0 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa3Q3UPR0 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Shisa3Q3UPR0 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa3Q3UPR0 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa3Q3UPR0 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa3Q3UPR0 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa3Q3UPR0 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa3Q3UPR0 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.12□□□□□ -0.63
Shisa3Q3UPR0 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa3Q3UPR0 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa3Q3UPR0 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa3Q3UPR0 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa3Q3UPR0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shisa3Q3UPR0 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Shisa3Q3UPR0 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.12□□□□□ -0.63
Shisa3Q3UPR0 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.12□□□□□ -0.63
Shisa3Q3UPR0 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Shisa3Q3UPR0 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Gm12859-201ENSMUST00000117834 427 ntBASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Gm13183-201ENSMUST00000118615 789 ntBASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Gm17795-201ENSMUST00000214505 757 ntBASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shisa3Q3UPR0 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms