Protein–RNA interactions for Protein: Q3TYP4

Tmem88b, Transmembrane protein 88B, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88bQ3TYP4 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tmem88bQ3TYP4 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Tmem88bQ3TYP4 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Tmem88bQ3TYP4 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tmem88bQ3TYP4 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tmem88bQ3TYP4 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Tmem88bQ3TYP4 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Tmem88bQ3TYP4 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.72□□□□□ -0.69
Tmem88bQ3TYP4 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.72□□□□□ -0.69
Tmem88bQ3TYP4 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tmem88bQ3TYP4 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 Gm15782-201ENSMUST00000121073 445 ntBASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 Gm3096-201ENSMUST00000185770 364 ntBASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tmem88bQ3TYP4 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tmem88bQ3TYP4 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Tmem88bQ3TYP4 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.7
Tmem88bQ3TYP4 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC10.71□□□□□ -0.7
Tmem88bQ3TYP4 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tmem88bQ3TYP4 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tmem88bQ3TYP4 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Tmem88bQ3TYP4 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tmem88bQ3TYP4 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Tmem88bQ3TYP4 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tmem88bQ3TYP4 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tmem88bQ3TYP4 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Tmem88bQ3TYP4 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Tmem88bQ3TYP4 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tmem88bQ3TYP4 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Gm11531-201ENSMUST00000117614 555 ntBASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Gm12616-201ENSMUST00000118594 382 ntBASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Gm14109-201ENSMUST00000118814 309 ntBASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Gm11331-201ENSMUST00000119764 288 ntBASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Gm12624-201ENSMUST00000177615 382 ntBASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Gm12621-201ENSMUST00000177760 382 ntBASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Gm12615-201ENSMUST00000177970 382 ntBASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Gm12622-201ENSMUST00000177975 382 ntBASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Gm12627-201ENSMUST00000178412 382 ntBASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Gm12625-201ENSMUST00000179122 382 ntBASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Gm12614-201ENSMUST00000179586 382 ntBASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Gm12613-201ENSMUST00000180323 382 ntBASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Gm27023-201ENSMUST00000182372 285 ntBASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.7□□□□□ -0.7
Tmem88bQ3TYP4 Gm5950-201ENSMUST00000213337 772 ntBASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms