Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.24□□□□□ -0.29
Smad1P70340 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.24□□□□□ -0.29
Smad1P70340 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smad1P70340 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smad1P70340 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smad1P70340 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smad1P70340 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smad1P70340 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.24□□□□□ -0.29
Smad1P70340 Gm26315-201ENSMUST00000083890 321 ntBASIC13.24□□□□□ -0.29
Smad1P70340 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Smad1P70340 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smad1P70340 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Smad1P70340 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smad1P70340 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smad1P70340 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smad1P70340 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smad1P70340 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smad1P70340 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smad1P70340 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smad1P70340 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smad1P70340 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smad1P70340 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smad1P70340 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.24□□□□□ -0.29
Smad1P70340 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.24□□□□□ -0.29
Smad1P70340 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.23□□□□□ -0.29
Smad1P70340 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 Gm23931-201ENSMUST00000103842 109 ntBASIC13.23□□□□□ -0.29
Smad1P70340 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.23□□□□□ -0.29
Smad1P70340 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.23□□□□□ -0.29
Smad1P70340 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.23□□□□□ -0.29
Smad1P70340 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.23□□□□□ -0.29
Smad1P70340 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Smad1P70340 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.23□□□□□ -0.29
Smad1P70340 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.23□□□□□ -0.29
Smad1P70340 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Smad1P70340 Gm27514-201ENSMUST00000183692 110 ntBASIC13.23□□□□□ -0.29
Smad1P70340 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.23□□□□□ -0.29
Smad1P70340 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.23□□□□□ -0.29
Smad1P70340 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.23□□□□□ -0.29
Smad1P70340 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Smad1P70340 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.23□□□□□ -0.29
Smad1P70340 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.23□□□□□ -0.29
Smad1P70340 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smad1P70340 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.23□□□□□ -0.29
Smad1P70340 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smad1P70340 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smad1P70340 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.22□□□□□ -0.29
Smad1P70340 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Smad1P70340 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smad1P70340 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.22□□□□□ -0.29
Smad1P70340 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smad1P70340 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smad1P70340 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.22□□□□□ -0.29
Smad1P70340 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Smad1P70340 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Smad1P70340 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Smad1P70340 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smad1P70340 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smad1P70340 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smad1P70340 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smad1P70340 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smad1P70340 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smad1P70340 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smad1P70340 Gm6447-201ENSMUST00000118905 835 ntBASIC13.22□□□□□ -0.29
Smad1P70340 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.22□□□□□ -0.29
Smad1P70340 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.22□□□□□ -0.29
Smad1P70340 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.22□□□□□ -0.29
Smad1P70340 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smad1P70340 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.22□□□□□ -0.29
Smad1P70340 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smad1P70340 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Smad1P70340 Gm40466-201ENSMUST00000212174 422 ntBASIC13.22□□□□□ -0.29
Smad1P70340 Gm6013-201ENSMUST00000212264 699 ntBASIC13.22□□□□□ -0.29
Smad1P70340 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms