Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.14□□□□□ -0.15
Hmgb1P63158 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.14□□□□□ -0.15
Hmgb1P63158 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Hmgb1P63158 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.14□□□□□ -0.15
Hmgb1P63158 Gm18018-201ENSMUST00000198273 408 ntBASIC14.14□□□□□ -0.15
Hmgb1P63158 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hmgb1P63158 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.14□□□□□ -0.15
Hmgb1P63158 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb1P63158 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb1P63158 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Hmgb1P63158 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Hmgb1P63158 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb1P63158 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hmgb1P63158 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb1P63158 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Hmgb1P63158 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Hmgb1P63158 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb1P63158 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Hmgb1P63158 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb1P63158 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.13□□□□□ -0.15
Hmgb1P63158 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb1P63158 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb1P63158 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb1P63158 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb1P63158 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb1P63158 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb1P63158 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb1P63158 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb1P63158 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.13□□□□□ -0.15
Hmgb1P63158 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb1P63158 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb1P63158 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb1P63158 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb1P63158 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.13□□□□□ -0.15
Hmgb1P63158 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb1P63158 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.13□□□□□ -0.15
Hmgb1P63158 Gm28911-201ENSMUST00000188837 117 ntBASIC14.13□□□□□ -0.15
Hmgb1P63158 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb1P63158 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.13□□□□□ -0.15
Hmgb1P63158 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.13□□□□□ -0.15
Hmgb1P63158 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.13□□□□□ -0.15
Hmgb1P63158 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Hmgb1P63158 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Hmgb1P63158 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb1P63158 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb1P63158 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb1P63158 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb1P63158 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb1P63158 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb1P63158 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.13□□□□□ -0.15
Hmgb1P63158 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb1P63158 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Hmgb1P63158 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb1P63158 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb1P63158 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb1P63158 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb1P63158 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb1P63158 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb1P63158 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hmgb1P63158 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb1P63158 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb1P63158 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Hmgb1P63158 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb1P63158 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb1P63158 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Hmgb1P63158 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Hmgb1P63158 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb1P63158 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb1P63158 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb1P63158 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.12□□□□□ -0.15
Hmgb1P63158 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb1P63158 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Hmgb1P63158 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Hmgb1P63158 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hmgb1P63158 Gm11618-201ENSMUST00000117946 267 ntBASIC14.12□□□□□ -0.15
Hmgb1P63158 Gm13612-201ENSMUST00000119276 390 ntBASIC14.12□□□□□ -0.15
Hmgb1P63158 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.12□□□□□ -0.15
Hmgb1P63158 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb1P63158 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb1P63158 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.12□□□□□ -0.15
Hmgb1P63158 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb1P63158 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.12□□□□□ -0.15
Hmgb1P63158 Gm38671-201ENSMUST00000200573 130 ntBASIC14.12□□□□□ -0.15
Hmgb1P63158 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.12□□□□□ -0.15
Hmgb1P63158 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.12□□□□□ -0.15
Hmgb1P63158 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb1P63158 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb1P63158 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb1P63158 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb1P63158 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb1P63158 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hmgb1P63158 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb1P63158 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb1P63158 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb1P63158 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.12□□□□□ -0.15
Hmgb1P63158 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb1P63158 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hmgb1P63158 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.12□□□□□ -0.15
Hmgb1P63158 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb1P63158 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms