Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ctdsp1P58466 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Ctdsp1P58466 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Ctdsp1P58466 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC9.96□□□□□ -0.81
Ctdsp1P58466 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Ctdsp1P58466 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Ctdsp1P58466 Gm28719-201ENSMUST00000187779 1757 ntBASIC9.96□□□□□ -0.81
Ctdsp1P58466 Gm10110-202ENSMUST00000228705 3220 ntBASIC9.96□□□□□ -0.81
Ctdsp1P58466 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Ctdsp1P58466 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ctdsp1P58466 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ctdsp1P58466 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Ctdsp1P58466 CT025681.1-201ENSMUST00000225453 1855 ntBASIC9.96□□□□□ -0.81
Ctdsp1P58466 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ctdsp1P58466 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Ctdsp1P58466 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ctdsp1P58466 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.81
Ctdsp1P58466 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ctdsp1P58466 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ctdsp1P58466 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC9.96□□□□□ -0.82
Ctdsp1P58466 Gm2420-201ENSMUST00000119864 2149 ntBASIC9.96□□□□□ -0.82
Ctdsp1P58466 Gm6222-201ENSMUST00000120787 396 ntBASIC9.96□□□□□ -0.82
Ctdsp1P58466 Gm15173-201ENSMUST00000122049 433 ntBASIC9.96□□□□□ -0.82
Ctdsp1P58466 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC9.96□□□□□ -0.82
Ctdsp1P58466 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Ctdsp1P58466 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ctdsp1P58466 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Ctdsp1P58466 Gm7230-201ENSMUST00000173026 815 ntBASIC9.96□□□□□ -0.82
Ctdsp1P58466 Gm27357-201ENSMUST00000183754 135 ntBASIC9.96□□□□□ -0.82
Ctdsp1P58466 Gm27300-201ENSMUST00000184085 97 ntBASIC9.96□□□□□ -0.82
Ctdsp1P58466 Gm27335-201ENSMUST00000184758 97 ntBASIC9.96□□□□□ -0.82
Ctdsp1P58466 Gm27704-201ENSMUST00000185094 107 ntBASIC9.96□□□□□ -0.82
Ctdsp1P58466 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Ctdsp1P58466 Ighv1-25-201ENSMUST00000195638 345 ntBASIC9.96□□□□□ -0.82
Ctdsp1P58466 AC090659.1-201ENSMUST00000224334 768 ntBASIC9.96□□□□□ -0.82
Ctdsp1P58466 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ctdsp1P58466 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ctdsp1P58466 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ctdsp1P58466 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ctdsp1P58466 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ctdsp1P58466 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Ctdsp1P58466 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Ctdsp1P58466 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ctdsp1P58466 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ctdsp1P58466 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ctdsp1P58466 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ctdsp1P58466 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Ctdsp1P58466 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC9.96□□□□□ -0.82
Ctdsp1P58466 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ctdsp1P58466 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ctdsp1P58466 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ctdsp1P58466 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ctdsp1P58466 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Ctdsp1P58466 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ctdsp1P58466 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ctdsp1P58466 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ctdsp1P58466 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ctdsp1P58466 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ctdsp1P58466 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ctdsp1P58466 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ctdsp1P58466 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Ctdsp1P58466 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ctdsp1P58466 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ctdsp1P58466 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ctdsp1P58466 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Ctdsp1P58466 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ctdsp1P58466 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Ctdsp1P58466 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ctdsp1P58466 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ctdsp1P58466 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ctdsp1P58466 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ctdsp1P58466 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ctdsp1P58466 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.95□□□□□ -0.82
Ctdsp1P58466 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Ctdsp1P58466 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ctdsp1P58466 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ctdsp1P58466 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ctdsp1P58466 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ctdsp1P58466 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ctdsp1P58466 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ctdsp1P58466 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC9.95□□□□□ -0.82
Ctdsp1P58466 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ctdsp1P58466 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ctdsp1P58466 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ctdsp1P58466 Gm11557-201ENSMUST00000120200 1008 ntBASIC9.95□□□□□ -0.82
Ctdsp1P58466 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC9.95□□□□□ -0.82
Ctdsp1P58466 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Ctdsp1P58466 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ctdsp1P58466 Gm8927-201ENSMUST00000181978 981 ntBASIC9.95□□□□□ -0.82
Ctdsp1P58466 Gm5177-201ENSMUST00000183092 997 ntBASIC9.95□□□□□ -0.82
Ctdsp1P58466 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC9.95□□□□□ -0.82
Ctdsp1P58466 Gm44357-201ENSMUST00000195897 142 ntBASIC9.95□□□□□ -0.82
Ctdsp1P58466 Gm19658-201ENSMUST00000196231 138 ntBASIC9.95□□□□□ -0.82
Ctdsp1P58466 Gm44367-201ENSMUST00000196836 138 ntBASIC9.95□□□□□ -0.82
Ctdsp1P58466 Gm44350-201ENSMUST00000197197 138 ntBASIC9.95□□□□□ -0.82
Ctdsp1P58466 Gm44390-201ENSMUST00000197533 144 ntBASIC9.95□□□□□ -0.82
Ctdsp1P58466 Gm44313-201ENSMUST00000198018 138 ntBASIC9.95□□□□□ -0.82
Ctdsp1P58466 Gm44486-201ENSMUST00000198508 138 ntBASIC9.95□□□□□ -0.82
Ctdsp1P58466 Gm44314-201ENSMUST00000199263 138 ntBASIC9.95□□□□□ -0.82
Ctdsp1P58466 Gm44394-201ENSMUST00000199558 138 ntBASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms