Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sssca1P56873 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sssca1P56873 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sssca1P56873 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Sssca1P56873 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Sssca1P56873 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sssca1P56873 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sssca1P56873 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sssca1P56873 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sssca1P56873 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sssca1P56873 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.36□□□□□ -0.75
Sssca1P56873 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.36□□□□□ -0.75
Sssca1P56873 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.36□□□□□ -0.75
Sssca1P56873 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Sssca1P56873 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.36□□□□□ -0.75
Sssca1P56873 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC10.36□□□□□ -0.75
Sssca1P56873 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC10.36□□□□□ -0.75
Sssca1P56873 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.36□□□□□ -0.75
Sssca1P56873 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC10.36□□□□□ -0.75
Sssca1P56873 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Sssca1P56873 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.36□□□□□ -0.75
Sssca1P56873 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.36□□□□□ -0.75
Sssca1P56873 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.36□□□□□ -0.75
Sssca1P56873 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Sssca1P56873 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
Sssca1P56873 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Sssca1P56873 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Sssca1P56873 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.36□□□□□ -0.75
Sssca1P56873 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.36□□□□□ -0.75
Sssca1P56873 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sssca1P56873 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Sssca1P56873 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sssca1P56873 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sssca1P56873 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sssca1P56873 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.35□□□□□ -0.75
Sssca1P56873 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sssca1P56873 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sssca1P56873 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sssca1P56873 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.35□□□□□ -0.75
Sssca1P56873 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sssca1P56873 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sssca1P56873 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sssca1P56873 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sssca1P56873 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.35□□□□□ -0.75
Sssca1P56873 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sssca1P56873 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sssca1P56873 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sssca1P56873 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sssca1P56873 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Sssca1P56873 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sssca1P56873 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sssca1P56873 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sssca1P56873 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sssca1P56873 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Sssca1P56873 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.35□□□□□ -0.75
Sssca1P56873 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Sssca1P56873 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Sssca1P56873 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC10.35□□□□□ -0.75
Sssca1P56873 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sssca1P56873 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.35□□□□□ -0.75
Sssca1P56873 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC10.35□□□□□ -0.75
Sssca1P56873 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms