Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Irf5P56477 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Irf5P56477 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Irf5P56477 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Irf5P56477 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Irf5P56477 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Irf5P56477 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Irf5P56477 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Irf5P56477 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Irf5P56477 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.29■□□□□ 0.04
Irf5P56477 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.29■□□□□ 0.04
Irf5P56477 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.29■□□□□ 0.04
Irf5P56477 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Irf5P56477 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Irf5P56477 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.29■□□□□ 0.04
Irf5P56477 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC15.29■□□□□ 0.04
Irf5P56477 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Gm25668-201ENSMUST00000157700 129 ntBASIC15.29■□□□□ 0.04
Irf5P56477 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Irf5P56477 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.29■□□□□ 0.04
Irf5P56477 Gm7046-201ENSMUST00000221351 977 ntBASIC15.29■□□□□ 0.04
Irf5P56477 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC15.29■□□□□ 0.04
Irf5P56477 AC102523.2-201ENSMUST00000227813 983 ntBASIC15.29■□□□□ 0.04
Irf5P56477 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Irf5P56477 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.29■□□□□ 0.04
Irf5P56477 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Irf5P56477 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC15.29■□□□□ 0.04
Irf5P56477 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Irf5P56477 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Irf5P56477 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Irf5P56477 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC15.28■□□□□ 0.04
Irf5P56477 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Irf5P56477 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Irf5P56477 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Irf5P56477 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Irf5P56477 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Irf5P56477 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Irf5P56477 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Irf5P56477 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.28■□□□□ 0.04
Irf5P56477 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC15.28■□□□□ 0.04
Irf5P56477 Gm15370-201ENSMUST00000117158 253 ntBASIC15.28■□□□□ 0.04
Irf5P56477 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Irf5P56477 Gm12997-201ENSMUST00000120207 640 ntBASIC15.28■□□□□ 0.04
Irf5P56477 Gm17376-201ENSMUST00000166016 84 ntBASIC15.28■□□□□ 0.04
Irf5P56477 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Irf5P56477 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC15.28■□□□□ 0.04
Irf5P56477 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.28■□□□□ 0.04
Irf5P56477 Gm21769-201ENSMUST00000211922 111 ntBASIC15.28■□□□□ 0.04
Irf5P56477 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC15.28■□□□□ 0.04
Irf5P56477 CT009754.4-201ENSMUST00000221430 565 ntBASIC15.28■□□□□ 0.04
Irf5P56477 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Irf5P56477 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Irf5P56477 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Irf5P56477 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Irf5P56477 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Irf5P56477 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Irf5P56477 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Irf5P56477 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Irf5P56477 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Irf5P56477 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Irf5P56477 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Irf5P56477 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Irf5P56477 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Irf5P56477 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Irf5P56477 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Irf5P56477 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Irf5P56477 Gm14667-201ENSMUST00000119448 1350 ntBASIC15.27■□□□□ 0.04
Irf5P56477 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Irf5P56477 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Irf5P56477 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Irf5P56477 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms