Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rrp1P56183 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Rrp1P56183 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.46□□□□□ -0.09
Rrp1P56183 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rrp1P56183 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rrp1P56183 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rrp1P56183 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Rrp1P56183 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.46□□□□□ -0.09
Rrp1P56183 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rrp1P56183 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rrp1P56183 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rrp1P56183 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rrp1P56183 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rrp1P56183 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rrp1P56183 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rrp1P56183 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.46□□□□□ -0.1
Rrp1P56183 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rrp1P56183 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rrp1P56183 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rrp1P56183 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rrp1P56183 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rrp1P56183 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rrp1P56183 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rrp1P56183 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rrp1P56183 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rrp1P56183 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rrp1P56183 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rrp1P56183 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rrp1P56183 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rrp1P56183 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rrp1P56183 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.45□□□□□ -0.1
Rrp1P56183 Gm9630-201ENSMUST00000178304 885 ntBASIC14.45□□□□□ -0.1
Rrp1P56183 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rrp1P56183 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rrp1P56183 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Rrp1P56183 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rrp1P56183 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Rrp1P56183 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rrp1P56183 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rrp1P56183 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.45□□□□□ -0.1
Rrp1P56183 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rrp1P56183 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Rrp1P56183 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rrp1P56183 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rrp1P56183 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.45□□□□□ -0.1
Rrp1P56183 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rrp1P56183 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rrp1P56183 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rrp1P56183 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rrp1P56183 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rrp1P56183 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rrp1P56183 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rrp1P56183 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rrp1P56183 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rrp1P56183 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rrp1P56183 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rrp1P56183 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rrp1P56183 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rrp1P56183 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rrp1P56183 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.44□□□□□ -0.1
Rrp1P56183 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rrp1P56183 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rrp1P56183 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.44□□□□□ -0.1
Rrp1P56183 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rrp1P56183 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rrp1P56183 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rrp1P56183 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rrp1P56183 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rrp1P56183 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rrp1P56183 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.44□□□□□ -0.1
Rrp1P56183 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rrp1P56183 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Rrp1P56183 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rrp1P56183 Mir7654-201ENSMUST00000185082 70 ntBASIC14.44□□□□□ -0.1
Rrp1P56183 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.44□□□□□ -0.1
Rrp1P56183 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rrp1P56183 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Rrp1P56183 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.44□□□□□ -0.1
Rrp1P56183 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.44□□□□□ -0.1
Rrp1P56183 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Rrp1P56183 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rrp1P56183 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rrp1P56183 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.44□□□□□ -0.1
Rrp1P56183 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rrp1P56183 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.44□□□□□ -0.1
Rrp1P56183 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rrp1P56183 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Rrp1P56183 Gm7104-201ENSMUST00000179741 2532 ntBASIC14.44□□□□□ -0.1
Rrp1P56183 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rrp1P56183 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rrp1P56183 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rrp1P56183 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rrp1P56183 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.44□□□□□ -0.1
Rrp1P56183 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.43□□□□□ -0.1
Rrp1P56183 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rrp1P56183 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.43□□□□□ -0.1
Rrp1P56183 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rrp1P56183 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Rrp1P56183 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.43□□□□□ -0.1
Rrp1P56183 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms