Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Atxn1P54254 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 Gm16202-201ENSMUST00000117532 544 ntBASIC12.76□□□□□ -0.37
Atxn1P54254 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Atxn1P54254 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.76□□□□□ -0.37
Atxn1P54254 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.76□□□□□ -0.37
Atxn1P54254 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Atxn1P54254 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.76□□□□□ -0.37
Atxn1P54254 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atxn1P54254 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Atxn1P54254 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atxn1P54254 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atxn1P54254 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.75□□□□□ -0.37
Atxn1P54254 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atxn1P54254 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Atxn1P54254 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atxn1P54254 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Atxn1P54254 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atxn1P54254 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atxn1P54254 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atxn1P54254 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atxn1P54254 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Atxn1P54254 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.75□□□□□ -0.37
Atxn1P54254 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Atxn1P54254 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
Atxn1P54254 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Atxn1P54254 Gm26361-201ENSMUST00000158868 186 ntBASIC12.75□□□□□ -0.37
Atxn1P54254 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atxn1P54254 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Atxn1P54254 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Atxn1P54254 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.75□□□□□ -0.37
Atxn1P54254 Gm45770-201ENSMUST00000212105 616 ntBASIC12.75□□□□□ -0.37
Atxn1P54254 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atxn1P54254 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atxn1P54254 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.75□□□□□ -0.37
Atxn1P54254 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atxn1P54254 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atxn1P54254 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atxn1P54254 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atxn1P54254 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atxn1P54254 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Atxn1P54254 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atxn1P54254 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atxn1P54254 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atxn1P54254 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atxn1P54254 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atxn1P54254 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Atxn1P54254 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atxn1P54254 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.75□□□□□ -0.37
Atxn1P54254 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atxn1P54254 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atxn1P54254 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Atxn1P54254 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.74□□□□□ -0.37
Atxn1P54254 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Atxn1P54254 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Atxn1P54254 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
Atxn1P54254 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.74□□□□□ -0.37
Atxn1P54254 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms