Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.41□□□□□ -0.42
Sox18P43680 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox18P43680 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Sox18P43680 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.41□□□□□ -0.42
Sox18P43680 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox18P43680 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox18P43680 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sox18P43680 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Sox18P43680 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox18P43680 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox18P43680 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC12.41□□□□□ -0.42
Sox18P43680 Gm28439-201ENSMUST00000187714 876 ntBASIC12.41□□□□□ -0.42
Sox18P43680 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox18P43680 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox18P43680 Gm18944-201ENSMUST00000207672 643 ntBASIC12.41□□□□□ -0.42
Sox18P43680 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox18P43680 Gm19189-201ENSMUST00000221689 754 ntBASIC12.41□□□□□ -0.42
Sox18P43680 CT025642.1-201ENSMUST00000224734 1219 ntBASIC12.41□□□□□ -0.42
Sox18P43680 AC154848.1-201ENSMUST00000225451 846 ntBASIC12.41□□□□□ -0.42
Sox18P43680 AC136019.1-201ENSMUST00000226503 1412 ntBASIC12.41□□□□□ -0.42
Sox18P43680 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox18P43680 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox18P43680 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Sox18P43680 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox18P43680 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox18P43680 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.41□□□□□ -0.42
Sox18P43680 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox18P43680 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox18P43680 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.41□□□□□ -0.42
Sox18P43680 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.41□□□□□ -0.42
Sox18P43680 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox18P43680 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox18P43680 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox18P43680 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox18P43680 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.4□□□□□ -0.42
Sox18P43680 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sox18P43680 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox18P43680 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox18P43680 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Sox18P43680 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox18P43680 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Sox18P43680 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox18P43680 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Sox18P43680 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox18P43680 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.4□□□□□ -0.42
Sox18P43680 Gm14301-201ENSMUST00000120181 324 ntBASIC12.4□□□□□ -0.42
Sox18P43680 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.4□□□□□ -0.42
Sox18P43680 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC12.4□□□□□ -0.42
Sox18P43680 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox18P43680 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox18P43680 Gm25700-201ENSMUST00000177693 110 ntBASIC12.4□□□□□ -0.42
Sox18P43680 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.4□□□□□ -0.42
Sox18P43680 Gm3096-201ENSMUST00000185770 364 ntBASIC12.4□□□□□ -0.42
Sox18P43680 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox18P43680 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.4□□□□□ -0.42
Sox18P43680 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sox18P43680 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC12.4□□□□□ -0.42
Sox18P43680 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox18P43680 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.4□□□□□ -0.42
Sox18P43680 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox18P43680 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox18P43680 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox18P43680 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox18P43680 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox18P43680 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sox18P43680 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox18P43680 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox18P43680 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox18P43680 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox18P43680 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Sox18P43680 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox18P43680 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.4□□□□□ -0.42
Sox18P43680 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox18P43680 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox18P43680 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox18P43680 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox18P43680 Gm42479-201ENSMUST00000198654 1356 ntBASIC12.4□□□□□ -0.42
Sox18P43680 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.4□□□□□ -0.42
Sox18P43680 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sox18P43680 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sox18P43680 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Sox18P43680 Gm44286-201ENSMUST00000204098 1487 ntBASIC12.4□□□□□ -0.43
Sox18P43680 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox18P43680 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox18P43680 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox18P43680 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Sox18P43680 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sox18P43680 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox18P43680 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox18P43680 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox18P43680 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox18P43680 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox18P43680 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox18P43680 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox18P43680 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Sox18P43680 Gm8194-201ENSMUST00000159783 859 ntBASIC12.39□□□□□ -0.43
Sox18P43680 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.39□□□□□ -0.43
Sox18P43680 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.39□□□□□ -0.43
Sox18P43680 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox18P43680 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms