Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf4P43488 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf4P43488 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf4P43488 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf4P43488 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Tnfsf4P43488 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.38□□□□□ -0.43
Tnfsf4P43488 Gm6152-201ENSMUST00000151704 340 ntBASIC12.38□□□□□ -0.43
Tnfsf4P43488 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.38□□□□□ -0.43
Tnfsf4P43488 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf4P43488 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Tnfsf4P43488 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.38□□□□□ -0.43
Tnfsf4P43488 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.38□□□□□ -0.43
Tnfsf4P43488 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.38□□□□□ -0.43
Tnfsf4P43488 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.38□□□□□ -0.43
Tnfsf4P43488 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Tnfsf4P43488 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf4P43488 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.38□□□□□ -0.43
Tnfsf4P43488 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf4P43488 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf4P43488 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf4P43488 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf4P43488 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf4P43488 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf4P43488 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf4P43488 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf4P43488 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Tnfsf4P43488 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf4P43488 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf4P43488 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Tnfsf4P43488 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Gm37917-201ENSMUST00000194711 392 ntBASIC12.37□□□□□ -0.43
Tnfsf4P43488 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.37□□□□□ -0.43
Tnfsf4P43488 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.37□□□□□ -0.43
Tnfsf4P43488 Gm18624-201ENSMUST00000220966 658 ntBASIC12.37□□□□□ -0.43
Tnfsf4P43488 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf4P43488 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf4P43488 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf4P43488 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf4P43488 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Tnfsf4P43488 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf4P43488 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf4P43488 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf4P43488 Matn2-203ENSMUST00000226766 3252 ntBASIC12.36□□□□□ -0.43
Tnfsf4P43488 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf4P43488 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.36□□□□□ -0.43
Tnfsf4P43488 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf4P43488 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.36□□□□□ -0.43
Tnfsf4P43488 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.36□□□□□ -0.43
Tnfsf4P43488 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf4P43488 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Tnfsf4P43488 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.36□□□□□ -0.43
Tnfsf4P43488 Mir6392-201ENSMUST00000184924 108 ntBASIC12.36□□□□□ -0.43
Tnfsf4P43488 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.36□□□□□ -0.43
Tnfsf4P43488 Gm18473-201ENSMUST00000220543 868 ntBASIC12.36□□□□□ -0.43
Tnfsf4P43488 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.36□□□□□ -0.43
Tnfsf4P43488 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Tnfsf4P43488 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf4P43488 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf4P43488 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf4P43488 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Tnfsf4P43488 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf4P43488 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf4P43488 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf4P43488 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf4P43488 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.36□□□□□ -0.43
Tnfsf4P43488 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms