Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cd9P40240 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.65□□□□□ -0.38
Cd9P40240 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.65□□□□□ -0.38
Cd9P40240 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.65□□□□□ -0.38
Cd9P40240 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd9P40240 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd9P40240 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd9P40240 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cd9P40240 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd9P40240 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd9P40240 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd9P40240 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cd9P40240 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cd9P40240 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd9P40240 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd9P40240 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cd9P40240 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.65□□□□□ -0.38
Cd9P40240 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cd9P40240 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd9P40240 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd9P40240 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd9P40240 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cd9P40240 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cd9P40240 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.65□□□□□ -0.38
Cd9P40240 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.65□□□□□ -0.39
Cd9P40240 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cd9P40240 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd9P40240 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd9P40240 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd9P40240 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd9P40240 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cd9P40240 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cd9P40240 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd9P40240 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cd9P40240 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cd9P40240 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cd9P40240 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cd9P40240 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd9P40240 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Cd9P40240 Gm11964-201ENSMUST00000120982 444 ntBASIC12.64□□□□□ -0.39
Cd9P40240 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cd9P40240 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.64□□□□□ -0.39
Cd9P40240 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cd9P40240 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cd9P40240 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Cd9P40240 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cd9P40240 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd9P40240 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
Cd9P40240 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd9P40240 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd9P40240 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd9P40240 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cd9P40240 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd9P40240 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd9P40240 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.64□□□□□ -0.39
Cd9P40240 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd9P40240 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cd9P40240 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cd9P40240 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cd9P40240 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cd9P40240 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd9P40240 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cd9P40240 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.63□□□□□ -0.39
Cd9P40240 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd9P40240 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd9P40240 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cd9P40240 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cd9P40240 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd9P40240 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cd9P40240 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd9P40240 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cd9P40240 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cd9P40240 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd9P40240 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.63□□□□□ -0.39
Cd9P40240 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cd9P40240 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cd9P40240 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd9P40240 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cd9P40240 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.63□□□□□ -0.39
Cd9P40240 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.63□□□□□ -0.39
Cd9P40240 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cd9P40240 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cd9P40240 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.63□□□□□ -0.39
Cd9P40240 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.63□□□□□ -0.39
Cd9P40240 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.63□□□□□ -0.39
Cd9P40240 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd9P40240 Snora73a-201ENSMUST00000082453 205 ntBASIC12.63□□□□□ -0.39
Cd9P40240 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.63□□□□□ -0.39
Cd9P40240 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cd9P40240 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cd9P40240 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd9P40240 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cd9P40240 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cd9P40240 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd9P40240 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd9P40240 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd9P40240 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd9P40240 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cd9P40240 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cd9P40240 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms